Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 AC107905.1-201ENST00000616204 426 ntBASIC6.04□□□□□ -1.44
USP8P40818 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP8P40818 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.04□□□□□ -1.44
USP8P40818 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
USP8P40818 AC091305.2-201ENST00000624049 1576 ntBASIC6.04□□□□□ -1.44
USP8P40818 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.04□□□□□ -1.44
USP8P40818 AC011755.1-201ENST00000623763 2049 ntBASIC6.04□□□□□ -1.44
USP8P40818 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
USP8P40818 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
USP8P40818 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 AC104623.2-202ENST00000623477 4002 ntBASIC6.03□□□□□ -1.44
USP8P40818 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 AC106872.5-201ENST00000508856 1416 ntBASIC6.03□□□□□ -1.44
USP8P40818 RNA5SP30-201ENST00000365552 115 ntBASIC6.03□□□□□ -1.44
USP8P40818 HMGN1P20-201ENST00000411849 300 ntBASIC6.03□□□□□ -1.44
USP8P40818 CASKP1-201ENST00000412870 582 ntBASIC6.03□□□□□ -1.44
USP8P40818 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.03□□□□□ -1.44
USP8P40818 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC6.03□□□□□ -1.44
USP8P40818 AC012512.1-201ENST00000446594 718 ntBASIC6.03□□□□□ -1.44
USP8P40818 RPS23P9-201ENST00000448848 438 ntBASIC6.03□□□□□ -1.44
USP8P40818 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.03□□□□□ -1.44
USP8P40818 FCF1P7-201ENST00000451185 558 ntBASIC6.03□□□□□ -1.44
USP8P40818 AC083899.1-201ENST00000454465 3819 ntBASIC6.03□□□□□ -1.44
USP8P40818 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.03□□□□□ -1.44
USP8P40818 NDUFA5P5-201ENST00000468361 342 ntBASIC6.03□□□□□ -1.44
USP8P40818 PMS2P3-207ENST00000529061 717 ntBASIC6.03□□□□□ -1.44
USP8P40818 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC6.03□□□□□ -1.44
USP8P40818 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP8P40818 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP8P40818 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.03□□□□□ -1.44
USP8P40818 AL451049.1-201ENST00000608672 497 ntBASIC6.03□□□□□ -1.44
USP8P40818 AL162574.1-201ENST00000615702 950 ntBASIC6.03□□□□□ -1.44
USP8P40818 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.03□□□□□ -1.44
USP8P40818 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.03□□□□□ -1.44
USP8P40818 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
USP8P40818 AC112198.2-201ENST00000426589 6996 ntBASIC6.03□□□□□ -1.44
USP8P40818 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
USP8P40818 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
USP8P40818 SRRM1P3-201ENST00000426911 2678 ntBASIC6.02□□□□□ -1.44
USP8P40818 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
USP8P40818 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.02□□□□□ -1.45
USP8P40818 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
USP8P40818 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 GAPDHP24-201ENST00000328713 983 ntBASIC6.02□□□□□ -1.45
USP8P40818 RPS3AP2-201ENST00000407190 754 ntBASIC6.02□□□□□ -1.45
USP8P40818 SNORA81-201ENST00000408493 178 ntBASIC6.02□□□□□ -1.45
USP8P40818 RN7SKP97-201ENST00000410966 333 ntBASIC6.02□□□□□ -1.45
USP8P40818 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 NENFP1-201ENST00000419476 466 ntBASIC6.02□□□□□ -1.45
USP8P40818 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.02□□□□□ -1.45
USP8P40818 RPS3P2-201ENST00000421346 701 ntBASIC6.02□□□□□ -1.45
USP8P40818 IPPKP1-201ENST00000422501 768 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC113412.1-201ENST00000425840 504 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.02□□□□□ -1.45
USP8P40818 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC6.02□□□□□ -1.45
USP8P40818 NANOGP9-201ENST00000439890 892 ntBASIC6.02□□□□□ -1.45
USP8P40818 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 UBFD1P1-201ENST00000473259 814 ntBASIC6.02□□□□□ -1.45
USP8P40818 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.02□□□□□ -1.45
USP8P40818 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.02□□□□□ -1.45
USP8P40818 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.02□□□□□ -1.45
USP8P40818 AC109481.1-201ENST00000509173 282 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.02□□□□□ -1.45
USP8P40818 RN7SKP253-201ENST00000516424 309 ntBASIC6.02□□□□□ -1.45
USP8P40818 RN7SKP70-201ENST00000516655 271 ntBASIC6.02□□□□□ -1.45
USP8P40818 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.02□□□□□ -1.45
USP8P40818 MRPS16P1-201ENST00000523462 412 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.02□□□□□ -1.45
USP8P40818 AC122688.1-201ENST00000541494 223 ntBASIC6.02□□□□□ -1.45
USP8P40818 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.02□□□□□ -1.45
USP8P40818 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.02□□□□□ -1.45
USP8P40818 MIR4311-201ENST00000580794 100 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC010615.3-201ENST00000597319 394 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC108865.2-201ENST00000606881 432 ntBASIC6.02□□□□□ -1.45
USP8P40818 AC100814.1-201ENST00000606963 623 ntBASIC6.02□□□□□ -1.45
USP8P40818 AL365181.4-201ENST00000609800 547 ntBASIC6.02□□□□□ -1.45
USP8P40818 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.02□□□□□ -1.45
USP8P40818 AL359742.1-201ENST00000622497 540 ntBASIC6.02□□□□□ -1.45
USP8P40818 SAMMSON-227ENST00000642114 1199 ntBASIC6.02□□□□□ -1.45
USP8P40818 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
USP8P40818 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
USP8P40818 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.02□□□□□ -1.45
USP8P40818 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
USP8P40818 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
USP8P40818 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms