Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 AC124944.2-201ENST00000429866 1242 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 AC090018.1-201ENST00000434369 367 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 AC002504.1-201ENST00000438281 691 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 SUMO2P3-201ENST00000438311 288 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 NPM1P19-201ENST00000450070 712 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 AC094085.1-201ENST00000468914 584 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.5□□□□□ -1.53
FDFT1P37268 AC016559.2-201ENST00000510759 359 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.5□□□□□ -1.53
FDFT1P37268 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.5□□□□□ -1.53
FDFT1P37268 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.5□□□□□ -1.53
FDFT1P37268 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.5□□□□□ -1.53
FDFT1P37268 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.5□□□□□ -1.53
FDFT1P37268 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.5□□□□□ -1.53
FDFT1P37268 AC009027.1-201ENST00000604510 479 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.5□□□□□ -1.53
FDFT1P37268 AC099654.6-201ENST00000636487 512 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
FDFT1P37268 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
FDFT1P37268 AC027279.1-201ENST00000568885 4284 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 AC005261.6-201ENST00000623072 1387 ntBASIC5.5□□□□□ -1.53
FDFT1P37268 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.5□□□□□ -1.53
FDFT1P37268 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
FDFT1P37268 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.5□□□□□ -1.53
FDFT1P37268 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.5□□□□□ -1.53
FDFT1P37268 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
FDFT1P37268 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FDFT1P37268 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
FDFT1P37268 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC073136.1-201ENST00000449426 2884 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.49□□□□□ -1.53
FDFT1P37268 RNU2-18P-201ENST00000411224 162 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 Z93019.1-201ENST00000416450 973 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AC013268.2-201ENST00000420753 337 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 TNPO1P1-201ENST00000423641 1138 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.49□□□□□ -1.53
FDFT1P37268 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.49□□□□□ -1.53
FDFT1P37268 TCEA1P3-201ENST00000443005 880 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.49□□□□□ -1.53
FDFT1P37268 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.49□□□□□ -1.53
FDFT1P37268 NDUFA5P5-201ENST00000468361 342 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.49□□□□□ -1.53
FDFT1P37268 RN7SKP99-201ENST00000517028 307 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC078878.1-201ENST00000539832 958 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC005726.4-201ENST00000582858 458 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC006363.1-201ENST00000603806 463 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AC016252.1-201ENST00000609721 474 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AL589935.2-201ENST00000616471 1231 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 AL512356.3-201ENST00000623005 461 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 AC091305.2-201ENST00000624049 1576 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
FDFT1P37268 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.49□□□□□ -1.53
FDFT1P37268 AC093909.5-201ENST00000621839 1799 ntBASIC5.49□□□□□ -1.53
FDFT1P37268 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.49□□□□□ -1.53
FDFT1P37268 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
FDFT1P37268 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
FDFT1P37268 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.48□□□□□ -1.53
FDFT1P37268 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
FDFT1P37268 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
FDFT1P37268 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.48□□□□□ -1.53
FDFT1P37268 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.48□□□□□ -1.53
FDFT1P37268 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
FDFT1P37268 OR9G4-201ENST00000302957 984 ntBASIC5.48□□□□□ -1.53
FDFT1P37268 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 RN7SKP153-201ENST00000365026 316 ntBASIC5.48□□□□□ -1.53
FDFT1P37268 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.48□□□□□ -1.53
FDFT1P37268 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
FDFT1P37268 SRSF1P1-201ENST00000424058 520 ntBASIC5.48□□□□□ -1.53
FDFT1P37268 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.48□□□□□ -1.53
FDFT1P37268 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms