Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FTH1P11-201ENST00000517577 551 ntBASIC5.32□□□□□ -1.56
RORAP35398 AGGF1P7-201ENST00000562369 913 ntBASIC5.32□□□□□ -1.56
RORAP35398 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 MIR4311-201ENST00000580794 100 ntBASIC5.32□□□□□ -1.56
RORAP35398 HIRAP1-201ENST00000605318 787 ntBASIC5.32□□□□□ -1.56
RORAP35398 SDR42E1P1-201ENST00000611327 477 ntBASIC5.32□□□□□ -1.56
RORAP35398 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.32□□□□□ -1.56
RORAP35398 AC132068.1-201ENST00000623805 459 ntBASIC5.32□□□□□ -1.56
RORAP35398 AC004808.2-201ENST00000627965 773 ntBASIC5.32□□□□□ -1.56
RORAP35398 CASC19-264ENST00000641912 1184 ntBASIC5.32□□□□□ -1.56
RORAP35398 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.32□□□□□ -1.56
RORAP35398 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
RORAP35398 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
RORAP35398 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.32□□□□□ -1.56
RORAP35398 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.32□□□□□ -1.56
RORAP35398 HSPA8P14-201ENST00000552265 1805 ntBASIC5.32□□□□□ -1.56
RORAP35398 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RORAP35398 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RORAP35398 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 AL359955.1-201ENST00000455242 3275 ntBASIC5.31□□□□□ -1.56
RORAP35398 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RORAP35398 RNU4-2-201ENST00000365668 141 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC007068.1-201ENST00000396690 844 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC009804.1-201ENST00000400949 179 ntBASIC5.31□□□□□ -1.56
RORAP35398 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 METTL15P3-201ENST00000415522 1221 ntBASIC5.31□□□□□ -1.56
RORAP35398 RPS27AP6-201ENST00000427962 448 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.31□□□□□ -1.56
RORAP35398 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.31□□□□□ -1.56
RORAP35398 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 RPL12P39-201ENST00000455456 496 ntBASIC5.31□□□□□ -1.56
RORAP35398 RPS4XP12-201ENST00000461747 709 ntBASIC5.31□□□□□ -1.56
RORAP35398 TSACC-207ENST00000470342 601 ntTSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 RN7SL799P-201ENST00000475891 298 ntBASIC5.31□□□□□ -1.56
RORAP35398 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 AC090638.1-201ENST00000498296 909 ntBASIC5.31□□□□□ -1.56
RORAP35398 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.31□□□□□ -1.56
RORAP35398 AC139697.1-201ENST00000548429 745 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC051619.2-201ENST00000559063 397 ntBASIC5.31□□□□□ -1.56
RORAP35398 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 AC016180.1-201ENST00000567945 403 ntBASIC5.31□□□□□ -1.56
RORAP35398 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 AC060780.2-201ENST00000589047 198 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC012616.1-201ENST00000600294 197 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC073575.2-201ENST00000614212 627 ntBASIC5.31□□□□□ -1.56
RORAP35398 AC005840.5-201ENST00000619166 599 ntBASIC5.31□□□□□ -1.56
RORAP35398 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RORAP35398 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RORAP35398 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RORAP35398 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
RORAP35398 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.3□□□□□ -1.56
RORAP35398 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.3□□□□□ -1.56
RORAP35398 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.3□□□□□ -1.56
RORAP35398 MTCO1P15-201ENST00000529569 1526 ntBASIC5.3□□□□□ -1.56
RORAP35398 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.3□□□□□ -1.56
RORAP35398 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RORAP35398 RNU6-171P-201ENST00000384354 107 ntBASIC5.3□□□□□ -1.56
RORAP35398 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RORAP35398 MIR1286-201ENST00000408112 78 ntBASIC5.3□□□□□ -1.56
RORAP35398 AL158827.1-201ENST00000416300 391 ntBASIC5.3□□□□□ -1.56
RORAP35398 GNG5P5-201ENST00000420444 220 ntBASIC5.3□□□□□ -1.56
RORAP35398 OR6D1P-201ENST00000436165 939 ntBASIC5.3□□□□□ -1.56
RORAP35398 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.3□□□□□ -1.56
RORAP35398 GAPDHP14-201ENST00000450472 937 ntBASIC5.3□□□□□ -1.56
RORAP35398 RPS7P6-201ENST00000485777 579 ntBASIC5.3□□□□□ -1.56
RORAP35398 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
RORAP35398 KATNBL1P4-201ENST00000503545 918 ntBASIC5.3□□□□□ -1.56
RORAP35398 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.3□□□□□ -1.56
RORAP35398 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RORAP35398 AC021146.10-201ENST00000515628 706 ntBASIC5.3□□□□□ -1.56
RORAP35398 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.3□□□□□ -1.56
RORAP35398 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.3□□□□□ -1.56
RORAP35398 AC027216.1-201ENST00000577726 685 ntBASIC5.3□□□□□ -1.56
RORAP35398 MIR1269B-201ENST00000580405 75 ntBASIC5.3□□□□□ -1.56
RORAP35398 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 14.2 ms