Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC6.69□□□□□ -1.34
COL8A1P27658 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.69□□□□□ -1.34
COL8A1P27658 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC6.69□□□□□ -1.34
COL8A1P27658 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.69□□□□□ -1.34
COL8A1P27658 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.69□□□□□ -1.34
COL8A1P27658 DPPA3P3-201ENST00000603842 430 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 GLYATL1-219ENST00000612196 909 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 AC245407.2-201ENST00000614199 451 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 AC092999.1-201ENST00000624004 1924 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 CD44-208ENST00000428726 3046 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 AP002358.1-201ENST00000399003 2805 ntTSL 2 BASIC6.69□□□□□ -1.34
COL8A1P27658 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
COL8A1P27658 AC109315.1-201ENST00000584143 1347 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.69□□□□□ -1.34
COL8A1P27658 LINC00622-201ENST00000562811 1570 ntBASIC6.69□□□□□ -1.34
COL8A1P27658 MAP3K13-203ENST00000424227 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 Z99129.3-201ENST00000624363 6430 ntTSL 2 BASIC6.69□□□□□ -1.34
COL8A1P27658 CCNB2-205ENST00000621385 2503 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
COL8A1P27658 APH1B-201ENST00000261879 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 LRRC37A11P-202ENST00000579258 3717 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 ARL6IP5-201ENST00000273258 2101 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 SLAMF7-211ENST00000621377 2608 ntTSL 2 BASIC6.68□□□□□ -1.34
COL8A1P27658 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 DIAPH3-201ENST00000267215 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 NPIPB5-207ENST00000451409 3660 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL8A1P27658 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 CD36-221ENST00000534394 1741 ntTSL 2 BASIC6.68□□□□□ -1.34
COL8A1P27658 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL8A1P27658 ZNF169-203ENST00000480716 2716 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 HEPH-201ENST00000336279 4228 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 IRAK4-214ENST00000613694 4280 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.68□□□□□ -1.34
COL8A1P27658 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 RNA5SP188-201ENST00000362916 129 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 RNU6-451P-201ENST00000362921 107 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 Y_RNA.259-201ENST00000364619 101 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 CBWD5-205ENST00000377395 1143 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 RNVU1-15-201ENST00000384476 165 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 PTP4A1P1-201ENST00000420539 515 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 AL512882.1-201ENST00000436086 832 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AL831737.1-201ENST00000441288 271 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AL121908.1-201ENST00000443055 668 ntTSL 4 BASIC6.68□□□□□ -1.34
COL8A1P27658 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
COL8A1P27658 CBWD4P-201ENST00000445695 655 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 HMGB1P16-201ENST00000447155 540 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 AC013399.1-201ENST00000450311 418 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC074386.1-201ENST00000476560 767 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC098818.1-201ENST00000478593 252 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 RPL37P23-201ENST00000492641 294 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.68□□□□□ -1.34
COL8A1P27658 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 NDUFA3P2-201ENST00000531434 232 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 OR7E87P-201ENST00000532397 929 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC6.68□□□□□ -1.34
COL8A1P27658 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC137768.1-201ENST00000549998 553 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC026464.1-202ENST00000564737 722 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 LINC01989-201ENST00000566930 1081 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6.68□□□□□ -1.34
COL8A1P27658 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC010591.1-201ENST00000603941 649 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC122710.3-201ENST00000606566 541 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.68□□□□□ -1.34
COL8A1P27658 AC005021.1-201ENST00000608730 355 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
COL8A1P27658 AC009268.2-201ENST00000621925 457 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC015722.2-201ENST00000622210 551 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC010653.3-201ENST00000635332 232 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 AC132825.8-201ENST00000640783 297 ntBASIC6.68□□□□□ -1.34
COL8A1P27658 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms