Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 AC092809.1-201ENST00000441469 474 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.78□□□□□ -1.16
RFX1P22670 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 RN7SL88P-201ENST00000480166 299 ntBASIC7.78□□□□□ -1.16
RFX1P22670 RN7SL849P-201ENST00000485236 295 ntBASIC7.78□□□□□ -1.16
RFX1P22670 CREM-242ENST00000490511 469 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 TCP11X3P-202ENST00000514289 1254 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC7.78□□□□□ -1.16
RFX1P22670 AP003392.2-201ENST00000527269 208 ntBASIC7.78□□□□□ -1.16
RFX1P22670 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC7.78□□□□□ -1.16
RFX1P22670 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 AC126177.6-201ENST00000550420 1009 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC021979.2-201ENST00000553644 209 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC7.78□□□□□ -1.16
RFX1P22670 ULK4P1-202ENST00000565174 503 ntBASIC7.78□□□□□ -1.16
RFX1P22670 EEF1B2P1-201ENST00000567221 672 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC138207.8-204ENST00000579588 527 ntBASIC7.78□□□□□ -1.16
RFX1P22670 IGLJCOR18-201ENST00000584002 424 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 AC126118.1-201ENST00000607744 628 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC024941.1-201ENST00000612250 334 ntBASIC7.78□□□□□ -1.16
RFX1P22670 AC099654.13-201ENST00000639774 207 ntBASIC7.78□□□□□ -1.16
RFX1P22670 OFD1P15Y-201ENST00000411536 1392 ntBASIC7.78□□□□□ -1.16
RFX1P22670 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
RFX1P22670 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.78□□□□□ -1.16
RFX1P22670 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 AL359922.2-201ENST00000581788 3017 ntBASIC7.78□□□□□ -1.16
RFX1P22670 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RFX1P22670 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.78□□□□□ -1.16
RFX1P22670 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.77□□□□□ -1.16
RFX1P22670 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.16
RFX1P22670 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC7.77□□□□□ -1.16
RFX1P22670 AL669831.5-218ENST00000591702 1873 ntBASIC7.77□□□□□ -1.17
RFX1P22670 SPRY1-201ENST00000339241 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 RPL11P4-201ENST00000332269 436 ntBASIC7.77□□□□□ -1.17
RFX1P22670 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 RNU6-1066P-201ENST00000363573 105 ntBASIC7.77□□□□□ -1.17
RFX1P22670 Y_RNA.302-201ENST00000364997 102 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 OR52E6-202ENST00000379946 954 ntBASIC7.77□□□□□ -1.17
RFX1P22670 RN7SKP62-201ENST00000384539 329 ntBASIC7.77□□□□□ -1.17
RFX1P22670 MIR199B-201ENST00000384849 110 ntBASIC7.77□□□□□ -1.17
RFX1P22670 RNU6-1055P-201ENST00000391085 107 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AL590762.1-201ENST00000391782 432 ntBASIC7.77□□□□□ -1.17
RFX1P22670 MTCO3P31-201ENST00000405526 789 ntBASIC7.77□□□□□ -1.17
RFX1P22670 ERMN-202ENST00000409216 746 ntTSL 4 BASIC7.77□□□□□ -1.17
RFX1P22670 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 OR8G2P-201ENST00000412796 908 ntBASIC7.77□□□□□ -1.17
RFX1P22670 VAV3-203ENST00000415432 1293 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 CYP4F32P-201ENST00000426492 504 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AL121916.1-201ENST00000429405 308 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 HNRNPA1P57-201ENST00000431359 530 ntTSL 4 BASIC7.77□□□□□ -1.17
RFX1P22670 AL159174.1-201ENST00000438267 811 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 AC016908.1-201ENST00000442571 1219 ntBASIC7.77□□□□□ -1.17
RFX1P22670 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 KF459542.1-201ENST00000450908 553 ntBASIC7.77□□□□□ -1.17
RFX1P22670 OR6C5P-201ENST00000452388 923 ntBASIC7.77□□□□□ -1.17
RFX1P22670 RN7SL160P-201ENST00000468558 284 ntBASIC7.77□□□□□ -1.17
RFX1P22670 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 RPL7P38-201ENST00000488396 739 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC122718.2-201ENST00000505325 591 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC108475.1-201ENST00000507880 950 ntBASIC7.77□□□□□ -1.17
RFX1P22670 RPL7L1P7-201ENST00000509986 724 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 FABP5P5-201ENST00000515537 406 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC7.77□□□□□ -1.17
RFX1P22670 AC092709.1-201ENST00000521355 1045 ntBASIC7.77□□□□□ -1.17
RFX1P22670 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC7.77□□□□□ -1.17
RFX1P22670 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 OR8G3P-201ENST00000533406 921 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC022509.1-203ENST00000541940 708 ntTSL 4 BASIC7.77□□□□□ -1.17
RFX1P22670 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms