Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 HCFC2P1-201ENST00000392864 1592 ntBASIC4.75□□□□□ -1.65
USF1P22415 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 AC093849.1-201ENST00000563631 2209 ntBASIC4.75□□□□□ -1.65
USF1P22415 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USF1P22415 MTHFD2P5-201ENST00000320415 844 ntBASIC4.75□□□□□ -1.65
USF1P22415 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
USF1P22415 DPPA2P3-201ENST00000411853 655 ntBASIC4.75□□□□□ -1.65
USF1P22415 METTL15P3-201ENST00000415522 1221 ntBASIC4.75□□□□□ -1.65
USF1P22415 NIFKP3-201ENST00000417799 865 ntBASIC4.75□□□□□ -1.65
USF1P22415 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 AL354766.1-201ENST00000423396 542 ntBASIC4.75□□□□□ -1.65
USF1P22415 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 CRIP1P1-201ENST00000427567 185 ntBASIC4.75□□□□□ -1.65
USF1P22415 FTLP19-201ENST00000433300 394 ntBASIC4.75□□□□□ -1.65
USF1P22415 PTMAP6-201ENST00000439110 327 ntBASIC4.75□□□□□ -1.65
USF1P22415 RANP1-206ENST00000455094 651 ntBASIC4.75□□□□□ -1.65
USF1P22415 RPS23P1-201ENST00000491662 432 ntBASIC4.75□□□□□ -1.65
USF1P22415 OR2A3P-201ENST00000493774 953 ntBASIC4.75□□□□□ -1.65
USF1P22415 HIGD1AP14-201ENST00000507617 282 ntBASIC4.75□□□□□ -1.65
USF1P22415 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 RN7SKP99-201ENST00000517028 307 ntBASIC4.75□□□□□ -1.65
USF1P22415 AC078899.1-201ENST00000521432 1185 ntBASIC4.75□□□□□ -1.65
USF1P22415 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 AL049779.2-201ENST00000553847 315 ntBASIC4.75□□□□□ -1.65
USF1P22415 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC096996.1-201ENST00000563813 325 ntBASIC4.75□□□□□ -1.65
USF1P22415 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
USF1P22415 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 PPATP2-201ENST00000605635 508 ntBASIC4.75□□□□□ -1.65
USF1P22415 AL133481.2-203ENST00000607558 139 ntBASIC4.75□□□□□ -1.65
USF1P22415 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 AC132068.1-201ENST00000623805 459 ntBASIC4.75□□□□□ -1.65
USF1P22415 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
USF1P22415 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
USF1P22415 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
USF1P22415 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
USF1P22415 RN7SKP28-201ENST00000364770 305 ntBASIC4.74□□□□□ -1.65
USF1P22415 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 EI24P3-201ENST00000399046 1062 ntBASIC4.74□□□□□ -1.65
USF1P22415 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.74□□□□□ -1.65
USF1P22415 AC010740.1-201ENST00000417035 684 ntBASIC4.74□□□□□ -1.65
USF1P22415 SLC35E1P1-201ENST00000419313 864 ntBASIC4.74□□□□□ -1.65
USF1P22415 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.74□□□□□ -1.65
USF1P22415 RPL12P18-201ENST00000437175 325 ntBASIC4.74□□□□□ -1.65
USF1P22415 AL450023.1-201ENST00000450868 751 ntBASIC4.74□□□□□ -1.65
USF1P22415 RN7SL172P-201ENST00000460535 303 ntBASIC4.74□□□□□ -1.65
USF1P22415 RPS23P2-201ENST00000463671 415 ntBASIC4.74□□□□□ -1.65
USF1P22415 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC4.74□□□□□ -1.65
USF1P22415 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 AC090638.1-201ENST00000498296 909 ntBASIC4.74□□□□□ -1.65
USF1P22415 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 AC093763.2-201ENST00000505334 1223 ntBASIC4.74□□□□□ -1.65
USF1P22415 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.74□□□□□ -1.65
USF1P22415 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
USF1P22415 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 AC007342.5-201ENST00000571340 2142 ntBASIC4.74□□□□□ -1.65
USF1P22415 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.74□□□□□ -1.65
USF1P22415 NANOGP3-201ENST00000605855 286 ntBASIC4.74□□□□□ -1.65
USF1P22415 AL121612.2-201ENST00000612261 482 ntBASIC4.74□□□□□ -1.65
USF1P22415 AC118658.2-201ENST00000618697 459 ntBASIC4.74□□□□□ -1.65
USF1P22415 AF117829.2-201ENST00000619538 361 ntBASIC4.74□□□□□ -1.65
USF1P22415 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms