Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC7.62□□□□□ -1.19
ERCC3P19447 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 AL078623.1-201ENST00000602702 907 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AL356986.1-201ENST00000604085 341 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC121247.2-201ENST00000604776 136 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 AL603755.1-201ENST00000619504 163 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC067852.7-201ENST00000623270 535 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC010608.2-201ENST00000624830 470 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 AC087821.2-201ENST00000637086 450 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 Z97989.1-201ENST00000531702 2421 ntBASIC7.62□□□□□ -1.19
ERCC3P19447 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC7.62□□□□□ -1.19
ERCC3P19447 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC7.62□□□□□ -1.19
ERCC3P19447 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
ERCC3P19447 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
ERCC3P19447 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 PABPC1P8-201ENST00000452851 2086 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AL354854.1-201ENST00000455940 1363 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 AC096992.2-201ENST00000609553 1684 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 RPL11P4-201ENST00000332269 436 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 RNA5SP433-201ENST00000364491 114 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 MIR188-201ENST00000385034 86 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 LYPLA1P3-201ENST00000402650 695 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 AC016907.1-201ENST00000419483 435 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 RPL21P43-201ENST00000425440 472 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC108479.1-201ENST00000431142 427 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC007679.3-201ENST00000434035 414 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 HMGN1P2-201ENST00000445197 310 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC7.61□□□□□ -1.19
ERCC3P19447 FTH1P8-201ENST00000498161 514 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC018645.1-201ENST00000505003 109 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC7.61□□□□□ -1.19
ERCC3P19447 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 OR9L1P-201ENST00000529493 933 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC7.61□□□□□ -1.19
ERCC3P19447 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.61□□□□□ -1.19
ERCC3P19447 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 AC146944.4-201ENST00000602697 718 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 AC004805.3-201ENST00000603178 310 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 Six3os1_4.1-201ENST00000615706 324 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 OFCC1-218ENST00000622909 754 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
ERCC3P19447 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.61□□□□□ -1.19
ERCC3P19447 AF001550.2-201ENST00000636643 217 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 IMMTP1-201ENST00000435590 2219 ntBASIC7.61□□□□□ -1.19
ERCC3P19447 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
ERCC3P19447 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
ERCC3P19447 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC7.6□□□□□ -1.19
ERCC3P19447 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 ASNSP6-201ENST00000592770 1618 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 AC020658.2-201ENST00000559030 4020 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
ERCC3P19447 SMG1P5-202ENST00000529428 4219 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 SMG1P2-201ENST00000566127 4221 ntBASIC7.6□□□□□ -1.19
ERCC3P19447 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.6□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms