Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC115283.1-201ENST00000427353 400 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN1P18031 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC073143.1-201ENST00000436316 395 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 THAP5P1-201ENST00000439089 262 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 XKRYP5-201ENST00000449659 483 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AL096803.2-201ENST00000450032 677 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 CYCSP42-201ENST00000450823 238 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 RPL7P45-201ENST00000455851 743 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC023245.1-201ENST00000468501 517 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 RN7SL165P-201ENST00000477476 291 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC093719.1-201ENST00000480427 441 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC079203.1-201ENST00000487972 404 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 RPS27AP16-201ENST00000492222 470 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 PFN1P8-201ENST00000497012 543 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC118282.2-201ENST00000508739 374 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC090819.1-201ENST00000523800 1111 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC068768.2-201ENST00000602352 343 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 BMS1P7-201ENST00000602440 1052 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC002069.2-201ENST00000603580 883 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC141002.1-201ENST00000607025 279 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 RN7SL261P-201ENST00000613441 282 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.53□□□□□ -1.36
PTPN1P18031 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 UGP2-231ENST00000627474 264 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AC003992.1-201ENST00000635364 557 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC116667.2-201ENST00000641075 823 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN1P18031 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN1P18031 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.53□□□□□ -1.36
PTPN1P18031 AL359091.1-201ENST00000449048 1734 ntBASIC6.53□□□□□ -1.36
PTPN1P18031 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.53□□□□□ -1.36
PTPN1P18031 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PTPN1P18031 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.53□□□□□ -1.36
PTPN1P18031 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PTPN1P18031 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.36
PTPN1P18031 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PTPN1P18031 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN1P18031 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PTPN1P18031 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 SNORD116-12-201ENST00000384468 92 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 MTND4P3-201ENST00000417829 541 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 NAP1L4P2-201ENST00000425958 899 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 RPL5P10-201ENST00000445207 894 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AL589880.1-201ENST00000448271 287 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 AC068228.1-201ENST00000461723 211 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AC023194.2-201ENST00000465398 406 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AL157777.1-201ENST00000468100 304 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 RPS3AP22-201ENST00000488297 769 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PTPN1P18031 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 Y_RNA.655-201ENST00000515919 96 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 SNORA81.2-201ENST00000516868 170 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.52□□□□□ -1.37
PTPN1P18031 AC087373.1-201ENST00000524920 491 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 OR6M2P-201ENST00000529831 871 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 GCSHP4-201ENST00000538792 439 ntBASIC6.52□□□□□ -1.37
PTPN1P18031 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.52□□□□□ -1.37
PTPN1P18031 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms