Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC126120.1-201ENST00000431082 470 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AC069154.1-201ENST00000432914 542 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AC015983.1-201ENST00000441577 373 ntBASIC5.61□□□□□ -1.51
PCNAP12004 BUD31P2-201ENST00000449374 300 ntBASIC5.61□□□□□ -1.51
PCNAP12004 FRG2FP-204ENST00000453982 852 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AP000547.1-201ENST00000454360 617 ntBASIC5.61□□□□□ -1.51
PCNAP12004 RPL12P39-201ENST00000455456 496 ntBASIC5.61□□□□□ -1.51
PCNAP12004 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCNAP12004 AC004129.2-201ENST00000457229 287 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 AL157777.1-201ENST00000468100 304 ntBASIC5.61□□□□□ -1.51
PCNAP12004 RN7SL57P-201ENST00000493687 290 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AC104629.1-201ENST00000494226 508 ntBASIC5.61□□□□□ -1.51
PCNAP12004 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCNAP12004 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 MTCO1P31-201ENST00000506355 492 ntBASIC5.61□□□□□ -1.51
PCNAP12004 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.61□□□□□ -1.51
PCNAP12004 GAPDHP71-201ENST00000511530 1003 ntBASIC5.61□□□□□ -1.51
PCNAP12004 HMGN1P15-201ENST00000513870 295 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AC027338.1-201ENST00000514840 825 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5.61□□□□□ -1.51
PCNAP12004 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.61□□□□□ -1.51
PCNAP12004 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.61□□□□□ -1.51
PCNAP12004 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCNAP12004 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.61□□□□□ -1.51
PCNAP12004 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PCNAP12004 PPATP2-201ENST00000605635 508 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AL136131.3-201ENST00000607600 188 ntBASIC5.61□□□□□ -1.51
PCNAP12004 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.61□□□□□ -1.51
PCNAP12004 MIR7109-201ENST00000613748 65 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.61□□□□□ -1.51
PCNAP12004 AC006840.1-201ENST00000623069 542 ntBASIC5.61□□□□□ -1.51
PCNAP12004 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 AC138965.3-201ENST00000623875 498 ntBASIC5.61□□□□□ -1.51
PCNAP12004 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.61□□□□□ -1.51
PCNAP12004 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCNAP12004 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
PCNAP12004 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PCNAP12004 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 ADAM24P-201ENST00000398655 2101 ntBASIC5.6□□□□□ -1.51
PCNAP12004 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 AC027088.4-201ENST00000611559 1947 ntBASIC5.6□□□□□ -1.51
PCNAP12004 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCNAP12004 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 OR56A4-201ENST00000330728 1209 ntBASIC5.6□□□□□ -1.51
PCNAP12004 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PCNAP12004 RN7SKP78-201ENST00000364711 318 ntBASIC5.6□□□□□ -1.51
PCNAP12004 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 METTL15P3-201ENST00000415522 1221 ntBASIC5.6□□□□□ -1.51
PCNAP12004 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.6□□□□□ -1.51
PCNAP12004 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 BX276092.6-201ENST00000430476 250 ntBASIC5.6□□□□□ -1.51
PCNAP12004 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.6□□□□□ -1.51
PCNAP12004 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.6□□□□□ -1.51
PCNAP12004 BX276092.8-201ENST00000455722 250 ntBASIC5.6□□□□□ -1.51
PCNAP12004 AC093166.4-201ENST00000457867 318 ntBASIC5.6□□□□□ -1.51
PCNAP12004 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.6□□□□□ -1.51
PCNAP12004 AC104629.2-201ENST00000468627 598 ntBASIC5.6□□□□□ -1.51
PCNAP12004 RN7SL188P-201ENST00000469842 285 ntBASIC5.6□□□□□ -1.51
PCNAP12004 AP002884.1-201ENST00000479691 655 ntBASIC5.6□□□□□ -1.51
PCNAP12004 RN7SL193P-201ENST00000491708 276 ntBASIC5.6□□□□□ -1.51
PCNAP12004 RNU6-1102P-201ENST00000516149 96 ntBASIC5.6□□□□□ -1.51
PCNAP12004 SCARNA18.1-201ENST00000516330 83 ntBASIC5.6□□□□□ -1.51
PCNAP12004 AL121594.2-201ENST00000541658 472 ntBASIC5.6□□□□□ -1.51
PCNAP12004 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.6□□□□□ -1.51
PCNAP12004 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.6□□□□□ -1.51
PCNAP12004 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.6□□□□□ -1.51
PCNAP12004 AC079148.1-201ENST00000565944 819 ntBASIC5.6□□□□□ -1.51
PCNAP12004 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.6□□□□□ -1.51
PCNAP12004 AC006115.2-201ENST00000596823 202 ntBASIC5.6□□□□□ -1.51
PCNAP12004 FAM27E4-201ENST00000605259 342 ntBASIC5.6□□□□□ -1.51
PCNAP12004 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.6□□□□□ -1.51
PCNAP12004 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.6□□□□□ -1.51
PCNAP12004 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PCNAP12004 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms