Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TPM1P09493 AC044810.1-201ENST00000480271 711 ntBASIC5.93□□□□□ -1.46
TPM1P09493 OR11I1P-201ENST00000486033 954 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.93□□□□□ -1.46
TPM1P09493 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.93□□□□□ -1.46
TPM1P09493 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.93□□□□□ -1.46
TPM1P09493 AC100784.1-201ENST00000522790 310 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AP000648.1-201ENST00000529682 397 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC5.93□□□□□ -1.46
TPM1P09493 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.93□□□□□ -1.46
TPM1P09493 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM1P09493 AP005403.1-201ENST00000579720 229 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.93□□□□□ -1.46
TPM1P09493 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 AC009027.1-201ENST00000604510 479 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AL031601.1-201ENST00000605702 394 ntBASIC5.93□□□□□ -1.46
TPM1P09493 OR8G3P-202ENST00000641572 1255 ntBASIC5.93□□□□□ -1.46
TPM1P09493 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TPM1P09493 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.92□□□□□ -1.46
TPM1P09493 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TPM1P09493 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 SNORA64.1-201ENST00000362600 132 ntBASIC5.92□□□□□ -1.46
TPM1P09493 RNA5SP232-201ENST00000364144 119 ntBASIC5.92□□□□□ -1.46
TPM1P09493 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 AC007738.1-201ENST00000413892 348 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.92□□□□□ -1.46
TPM1P09493 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.92□□□□□ -1.46
TPM1P09493 RPL12P17-201ENST00000432393 498 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AL136455.1-201ENST00000441083 1240 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC093166.3-201ENST00000448785 303 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.92□□□□□ -1.46
TPM1P09493 AC098818.1-201ENST00000478593 252 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.92□□□□□ -1.46
TPM1P09493 LSM3P4-201ENST00000502948 309 ntBASIC5.92□□□□□ -1.46
TPM1P09493 CASP1P2-201ENST00000526830 1258 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC130364.2-201ENST00000528639 604 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM1P09493 CYCSP38-201ENST00000559840 322 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AL390726.5-202ENST00000564800 256 ntBASIC5.92□□□□□ -1.46
TPM1P09493 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 OR1E3-201ENST00000575608 948 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.92□□□□□ -1.46
TPM1P09493 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.92□□□□□ -1.46
TPM1P09493 RN7SL544P-201ENST00000617232 284 ntBASIC5.92□□□□□ -1.46
TPM1P09493 RN7SL763P-201ENST00000620922 284 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC129778.1-202ENST00000623812 261 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 AL591379.1-207ENST00000635982 261 ntBASIC5.92□□□□□ -1.46
TPM1P09493 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.92□□□□□ -1.46
TPM1P09493 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.92□□□□□ -1.46
TPM1P09493 AC087565.3-203ENST00000641018 837 ntBASIC5.92□□□□□ -1.46
TPM1P09493 LYARP1-201ENST00000436977 1501 ntBASIC5.92□□□□□ -1.46
TPM1P09493 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 AC011447.7-201ENST00000624228 1590 ntBASIC5.92□□□□□ -1.46
TPM1P09493 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TPM1P09493 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
TPM1P09493 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM1P09493 AC021242.1-201ENST00000507315 2035 ntBASIC5.91□□□□□ -1.46
TPM1P09493 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TPM1P09493 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 OR9G4-201ENST00000302957 984 ntBASIC5.91□□□□□ -1.46
TPM1P09493 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM1P09493 RN7SKP6-201ENST00000364795 319 ntBASIC5.91□□□□□ -1.46
TPM1P09493 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
TPM1P09493 RPL12P9-201ENST00000412942 488 ntBASIC5.91□□□□□ -1.46
TPM1P09493 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.91□□□□□ -1.46
TPM1P09493 AC104333.2-201ENST00000422630 192 ntBASIC5.91□□□□□ -1.46
TPM1P09493 NANOGP4-201ENST00000427230 913 ntBASIC5.91□□□□□ -1.46
TPM1P09493 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM1P09493 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM1P09493 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TPM1P09493 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
TPM1P09493 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.91□□□□□ -1.46
TPM1P09493 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM1P09493 HSD3BP3-201ENST00000514706 994 ntBASIC5.91□□□□□ -1.46
TPM1P09493 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.91□□□□□ -1.46
TPM1P09493 Y_RNA.667-201ENST00000516212 107 ntBASIC5.91□□□□□ -1.46
TPM1P09493 RNA5SP438-201ENST00000516561 112 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms