Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC105105.5-201ENST00000622635 1294 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 AC015660.5-201ENST00000623238 564 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 AC099654.6-201ENST00000636487 512 ntBASIC6.39□□□□□ -1.39
COL1A1P02452 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
COL1A1P02452 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC6.38□□□□□ -1.39
COL1A1P02452 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC6.38□□□□□ -1.39
COL1A1P02452 THAP12P4-201ENST00000528321 2266 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL1A1P02452 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL1A1P02452 MIR141-201ENST00000384975 95 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 CYB5AP4-201ENST00000396692 399 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AC013442.1-201ENST00000397347 228 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 RAB28P1-201ENST00000411517 641 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 BX276092.6-201ENST00000430476 250 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AC099670.2-201ENST00000435130 321 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 RPL34P20-201ENST00000442771 351 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 TAAR4P-201ENST00000454843 1039 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 BX276092.8-201ENST00000455722 250 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 GYG1P1-201ENST00000460864 698 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL1A1P02452 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 GTF2F2P1-201ENST00000511083 675 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 RNA5SP116-201ENST00000516132 98 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.38□□□□□ -1.39
COL1A1P02452 MIR4691-201ENST00000583764 85 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.38□□□□□ -1.39
COL1A1P02452 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC6.38□□□□□ -1.39
COL1A1P02452 AF230666.2-201ENST00000602328 725 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AL139124.1-201ENST00000609123 421 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AP005131.7-201ENST00000610087 611 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 AC091905.4-201ENST00000623432 202 ntBASIC6.38□□□□□ -1.39
COL1A1P02452 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.38□□□□□ -1.39
COL1A1P02452 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL1A1P02452 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.38□□□□□ -1.39
COL1A1P02452 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL1A1P02452 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.37□□□□□ -1.39
COL1A1P02452 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.37□□□□□ -1.39
COL1A1P02452 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL1A1P02452 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.37□□□□□ -1.39
COL1A1P02452 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL1A1P02452 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC6.37□□□□□ -1.39
COL1A1P02452 VDAC1P6-201ENST00000430062 855 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.37□□□□□ -1.39
COL1A1P02452 AC097484.1-201ENST00000471148 389 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 AP000797.2-201ENST00000475768 606 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.37□□□□□ -1.39
COL1A1P02452 AC084824.2-201ENST00000548906 345 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.37□□□□□ -1.39
COL1A1P02452 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.37□□□□□ -1.39
COL1A1P02452 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.37□□□□□ -1.39
COL1A1P02452 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.37□□□□□ -1.39
COL1A1P02452 AC009027.1-201ENST00000604510 479 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 uc_338.18-201ENST00000615451 175 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 AP003400.3-201ENST00000624904 346 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL1A1P02452 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.37□□□□□ -1.39
COL1A1P02452 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COL1A1P02452 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL1A1P02452 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL1A1P02452 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
COL1A1P02452 MSL3P1-202ENST00000440028 1468 ntBASIC6.37□□□□□ -1.39
COL1A1P02452 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL1A1P02452 AC004076.2-201ENST00000620532 3323 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.36□□□□□ -1.39
COL1A1P02452 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL1A1P02452 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL1A1P02452 AC010132.2-201ENST00000295493 1043 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC6.36□□□□□ -1.39
COL1A1P02452 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.36□□□□□ -1.39
COL1A1P02452 RPS4XP16-201ENST00000427198 791 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.36□□□□□ -1.39
COL1A1P02452 AL672167.3-201ENST00000465951 960 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 AC006463.2-201ENST00000473326 348 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC087360.1-201ENST00000518788 616 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC074050.1-201ENST00000563247 211 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
COL1A1P02452 AC234771.5-201ENST00000600161 514 ntBASIC6.36□□□□□ -1.39
COL1A1P02452 AC093799.2-201ENST00000610062 578 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms