Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC132068.1-201ENST00000623805 459 ntBASIC5.24□□□□□ -1.57
CLDN9O95484 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.24□□□□□ -1.57
CLDN9O95484 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.24□□□□□ -1.57
CLDN9O95484 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CLDN9O95484 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CLDN9O95484 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN9O95484 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC079298.1-201ENST00000625026 1619 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 AL513548.1-201ENST00000562904 1724 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC010266.2-201ENST00000564741 3255 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLDN9O95484 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN9O95484 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 RNU1-19P-201ENST00000363306 165 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 RN7SKP292-201ENST00000365522 317 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLDN9O95484 DBIP1-201ENST00000401435 260 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN9O95484 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 RPL19P16-201ENST00000433839 588 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN9O95484 AL672138.1-201ENST00000450604 1015 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC084754.1-201ENST00000463466 464 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 AP002371.1-201ENST00000463604 433 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 AC007998.1-201ENST00000474156 672 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN9O95484 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 RNU6-943P-201ENST00000516960 98 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN9O95484 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 MTND2P17-201ENST00000550281 688 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 RN7SL753P-201ENST00000581238 290 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 RN7SL356P-201ENST00000582228 248 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 MIR4505-201ENST00000582238 73 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.23□□□□□ -1.57
CLDN9O95484 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN9O95484 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.23□□□□□ -1.57
CLDN9O95484 AC244517.3-201ENST00000616254 1235 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 AC099654.6-201ENST00000636487 512 ntBASIC5.23□□□□□ -1.57
CLDN9O95484 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN9O95484 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CLDN9O95484 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.23□□□□□ -1.57
CLDN9O95484 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CLDN9O95484 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
CLDN9O95484 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN9O95484 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
CLDN9O95484 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 AC097063.1-201ENST00000426714 1797 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.22□□□□□ -1.57
CLDN9O95484 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.22□□□□□ -1.57
CLDN9O95484 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 OR1L6-202ENST00000373684 1044 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN9O95484 RNA5SP284-201ENST00000384547 118 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 SDHDP6-201ENST00000414693 480 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN9O95484 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN9O95484 TNPO1P1-201ENST00000423641 1138 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 MGAT2P2-201ENST00000427194 797 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.22□□□□□ -1.57
CLDN9O95484 AC090804.1-201ENST00000448870 490 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.22□□□□□ -1.57
CLDN9O95484 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
CLDN9O95484 RPS24P16-201ENST00000497294 392 ntBASIC5.22□□□□□ -1.57
CLDN9O95484 HMGB1P44-201ENST00000508597 572 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms