Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 AC104260.2-201ENST00000623551 3497 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SSSCA1O60232 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.27□□□□□ -1.73
SSSCA1O60232 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSSCA1O60232 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.27□□□□□ -1.73
SSSCA1O60232 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
SSSCA1O60232 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC4.26□□□□□ -1.73
SSSCA1O60232 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 COX6B1P3-201ENST00000312310 260 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 RNA5SP273-201ENST00000362484 113 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSSCA1O60232 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 RPL36AP10-201ENST00000421785 322 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AC113412.1-201ENST00000425840 504 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AC127526.2-201ENST00000426436 775 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.26□□□□□ -1.73
SSSCA1O60232 AC064862.5-201ENST00000440618 334 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.26□□□□□ -1.73
SSSCA1O60232 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 AL672138.1-201ENST00000450604 1015 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 BX842559.2-201ENST00000451418 605 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 RN7SL189P-201ENST00000468631 289 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 SNORA70.20-201ENST00000516848 126 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 AP004607.2-201ENST00000533949 322 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AC009597.2-201ENST00000604659 592 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AL512413.1-201ENST00000606489 382 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.26□□□□□ -1.73
SSSCA1O60232 AC005828.7-201ENST00000607331 556 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC4.26□□□□□ -1.73
SSSCA1O60232 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 AC008691.1-209ENST00000642094 814 ntBASIC4.26□□□□□ -1.73
SSSCA1O60232 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.26□□□□□ -1.73
SSSCA1O60232 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
SSSCA1O60232 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SSSCA1O60232 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSSCA1O60232 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSSCA1O60232 RNU1-150P-201ENST00000362491 162 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC013442.1-201ENST00000397347 228 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 AL034417.1-201ENST00000399343 800 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 HSPA8P15-201ENST00000401676 786 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AL035079.1-201ENST00000405210 287 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 MIR1271-201ENST00000408537 86 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC4.25□□□□□ -1.73
SSSCA1O60232 KCTD9P1-201ENST00000430462 1167 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AL389925.1-201ENST00000432257 728 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 GSTM5P1-201ENST00000434751 660 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AL356121.1-201ENST00000442911 156 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 DNAJB5P1-201ENST00000454004 806 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.25□□□□□ -1.73
SSSCA1O60232 RBBP4P1-201ENST00000502424 1276 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC114781.3-201ENST00000512083 142 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 OR5H7P-201ENST00000514084 930 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 RNA5SP303-201ENST00000516192 130 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.25□□□□□ -1.73
SSSCA1O60232 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC079905.1-201ENST00000549280 475 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 CYCSP38-201ENST00000559840 322 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.25□□□□□ -1.73
SSSCA1O60232 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.25□□□□□ -1.73
SSSCA1O60232 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC012616.1-201ENST00000600294 197 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AC018695.5-201ENST00000605872 315 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AL132656.3-201ENST00000606384 1595 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AP001437.1-201ENST00000608783 456 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC015871.5-202ENST00000623252 701 ntBASIC4.25□□□□□ -1.73
SSSCA1O60232 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC4.25□□□□□ -1.73
SSSCA1O60232 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSSCA1O60232 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms