Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AP000547.1-201ENST00000454360 617 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPL15P21-201ENST00000495592 567 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC078899.1-201ENST00000521432 1185 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC022832.1-201ENST00000530718 645 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 OOSP1P2-201ENST00000579644 351 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC010503.3-201ENST00000594355 540 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC006115.2-201ENST00000596823 202 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC012616.1-201ENST00000600294 197 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC074101.1-201ENST00000637861 241 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC083843.2-201ENST00000568248 6253 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 FBXL21-201ENST00000297158 1305 ntBASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
TMX2-CTNND1H3BSU7 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 RNA5SP183-201ENST00000362452 119 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SKP213-201ENST00000410746 298 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 DPPA2P3-201ENST00000411853 655 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 RPS11P7-201ENST00000442125 465 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 RN7SL197P-201ENST00000466981 299 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 MIR4311-201ENST00000580794 100 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 AC010487.1-201ENST00000594408 1172 ntBASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.4□□□□□ -1.54
TMX2-CTNND1H3BSU7 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC125336.1-201ENST00000508893 2827 ntBASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.4□□□□□ -1.55
TMX2-CTNND1H3BSU7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC092376.2-201ENST00000622621 4116 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 ALB-220ENST00000621628 1606 ntTSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 RNA5SP234-201ENST00000363916 119 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL645927.1-201ENST00000396783 406 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC006335.2-201ENST00000437993 330 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC019185.1-201ENST00000442718 389 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 EEF1B2P5-201ENST00000444820 548 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC004815.1-201ENST00000484185 331 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 PDCL3P4-201ENST00000489621 720 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC004948.1-201ENST00000609858 672 ntBASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
TMX2-CTNND1H3BSU7 BCORP1-203ENST00000513194 5093 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms