Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 OR9G4-201ENST00000302957 984 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 GAPDHP24-201ENST00000328713 983 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP250-201ENST00000363924 321 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AL133260.1-201ENST00000405720 405 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 Z68694.1-201ENST00000413929 841 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 SMC4P1-201ENST00000414479 527 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 RPL35AP3-201ENST00000414680 288 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 OR13Z1P-201ENST00000416141 834 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AL139158.1-201ENST00000424719 340 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC007383.1-201ENST00000445875 636 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 RN7SL570P-201ENST00000484405 292 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC022133.1-201ENST00000490961 571 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AP002981.1-201ENST00000517692 975 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC105031.1-201ENST00000518550 476 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 OR10D4P-201ENST00000525892 951 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC090022.1-201ENST00000546569 311 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 AC011500.1-201ENST00000601963 469 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 TAS2R6P-201ENST00000605022 826 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 RPSAP75-201ENST00000605848 301 ntBASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.27□□□□□ -1.73
RBFOX3A6NFN3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP28-201ENST00000364770 305 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 GAPDHP15-201ENST00000398586 975 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP199-201ENST00000410325 305 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RPL7AP51-201ENST00000422016 760 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RPL35AP21-201ENST00000437667 333 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AL590004.3-202ENST00000445883 451 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 VN1R96P-201ENST00000446052 858 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 OR52Y1P-201ENST00000452418 828 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RN7SL269P-201ENST00000467795 305 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 CBX1P5-201ENST00000475330 559 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC098818.1-201ENST00000478593 252 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 TRBV8-1-201ENST00000481590 279 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC016687.1-201ENST00000482574 353 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC117500.1-201ENST00000497352 755 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC073358.1-201ENST00000505671 684 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC113367.2-201ENST00000505749 160 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 RNA5SP464-201ENST00000516251 108 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC022360.1-201ENST00000521058 340 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC234775.3-201ENST00000564612 656 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 MT1CP-201ENST00000567054 174 ntBASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
RBFOX3A6NFN3 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms