Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU4-23P-201ENST00000362839 140 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 RNA5SP132-201ENST00000364725 118 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 OR6D1P-201ENST00000436165 939 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AL596266.1-201ENST00000448132 400 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 RANP1-206ENST00000455094 651 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC104849.1-201ENST00000462623 405 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 RPL35AP19-201ENST00000469425 329 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC093719.1-201ENST00000480427 441 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 RN7SKP253-201ENST00000516424 309 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC006518.1-201ENST00000541449 943 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 AC092574.1-201ENST00000609771 420 ntBASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
SNX9Q9Y5X1 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 AC006484.1-201ENST00000435086 1884 ntBASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 CASC19-248ENST00000641674 1356 ntBASIC5.96□□□□□ -1.45
SNX9Q9Y5X1 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 RNA5SP319-201ENST00000362768 119 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 RN7SKP6-201ENST00000364795 319 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 MIR551A-201ENST00000385042 96 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 XKRYP6-201ENST00000440468 1116 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 XKRYP3-201ENST00000442113 1116 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 RN7SL184P-201ENST00000488308 297 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AGGF1P3-201ENST00000493675 1213 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 EIF3LP3-201ENST00000495197 822 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 RN7SL284P-201ENST00000498823 275 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AC079395.2-201ENST00000610982 737 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 AL118522.2-201ENST00000616045 615 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 MIR6886-201ENST00000619864 61 ntBASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
SNX9Q9Y5X1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AP002512.4-202ENST00000641599 4530 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 PROS2P-201ENST00000474651 1951 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 RN7SKP160-201ENST00000363804 340 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AL136116.2-201ENST00000404020 785 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 DHFRP5-201ENST00000406944 564 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 GABARAPL3-201ENST00000412799 354 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AL354766.1-201ENST00000423396 542 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 MGAT2P2-201ENST00000427194 797 ntBASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.95□□□□□ -1.46
SNX9Q9Y5X1 RN7SL51P-201ENST00000468230 285 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms