Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
SCN11AQ9UI33 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 BX323845.1-201ENST00000432417 179 ntBASIC6.73□□□□□ -1.33
SCN11AQ9UI33 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 snoU13.29-201ENST00000459370 104 ntBASIC6.73□□□□□ -1.33
SCN11AQ9UI33 RN7SL738P-201ENST00000470264 297 ntBASIC6.73□□□□□ -1.33
SCN11AQ9UI33 AC006463.2-201ENST00000473326 348 ntBASIC6.73□□□□□ -1.33
SCN11AQ9UI33 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 AC099654.6-201ENST00000636487 512 ntBASIC6.73□□□□□ -1.33
SCN11AQ9UI33 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 C1orf132-203ENST00000608023 15145 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.73□□□□□ -1.33
SCN11AQ9UI33 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 OR9G4-201ENST00000302957 984 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 RNA5SP505-201ENST00000364748 108 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AP002530.1-201ENST00000405705 684 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC112498.1-201ENST00000444401 332 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC009220.1-201ENST00000451614 275 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 RPS29P22-201ENST00000472363 168 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC140172.1-201ENST00000502928 141 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AL031320.1-201ENST00000604177 357 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AL139124.1-201ENST00000609123 421 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 MIR600-201ENST00000385007 98 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AL133482.1-201ENST00000415988 498 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 RPS29P10-201ENST00000439197 166 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 RBMY2TP-201ENST00000451162 947 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 PRELID3BP5-201ENST00000508612 460 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 AC005618.4-201ENST00000625053 554 ntBASIC6.72□□□□□ -1.33
SCN11AQ9UI33 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.72□□□□□ -1.33
SCN11AQ9UI33 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 MIPEPP2-201ENST00000422560 1819 ntBASIC6.71□□□□□ -1.33
SCN11AQ9UI33 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 NUP93-202ENST00000542526 8257 ntTSL 2 BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
SCN11AQ9UI33 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 CHMP1B2P-201ENST00000399581 597 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 OR7H2P-201ENST00000513483 306 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 OR8Q1P-201ENST00000526467 655 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 GCSHP4-201ENST00000538792 439 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AC087283.1-201ENST00000604029 1074 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AC005084.1-201ENST00000605160 304 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AC009704.2-201ENST00000618739 483 ntBASIC6.71□□□□□ -1.34
SCN11AQ9UI33 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.71□□□□□ -1.34
SCN11AQ9UI33 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 AC006210.2-201ENST00000367074 1545 ntBASIC6.7□□□□□ -1.34
SCN11AQ9UI33 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 GAPDHP56-201ENST00000506031 988 ntBASIC6.7□□□□□ -1.34
SCN11AQ9UI33 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.7□□□□□ -1.34
SCN11AQ9UI33 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 275.5 ms