Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 AC112198.2-201ENST00000426589 6996 ntBASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
VPS29Q9UBQ0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 HSPA8P15-201ENST00000401676 786 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 KCTD9P1-201ENST00000430462 1167 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AL390119.1-201ENST00000440329 312 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC073909.1-201ENST00000447112 999 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 RPL31P15-201ENST00000449770 338 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 YWHAEP1-201ENST00000453697 763 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 DNAJB5P1-201ENST00000454004 806 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC079168.1-201ENST00000458741 345 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC093827.1-201ENST00000480094 861 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AL049874.2-201ENST00000492636 288 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 EIF3KP3-201ENST00000514461 639 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 MTCYBP13-201ENST00000578634 1093 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 RN7SL787P-201ENST00000613000 284 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC127024.6-201ENST00000621598 424 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC091932.2-201ENST00000623014 291 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AL691477.1-201ENST00000624398 162 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC005005.4-201ENST00000623789 16698 ntBASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VPS29Q9UBQ0 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 RNA5SP187-201ENST00000384400 119 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AL133388.1-201ENST00000404509 287 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 RPS10P18-201ENST00000442662 495 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 CBX1P5-201ENST00000475330 559 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 DEFB109A-201ENST00000482450 265 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AC058823.1-201ENST00000485315 474 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 RN7SL423P-201ENST00000486202 304 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 RPL15P21-201ENST00000495592 567 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 GOLGA5P1-201ENST00000507317 980 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 ASNSP4-201ENST00000511103 447 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 TMEM97P2-201ENST00000517841 403 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AC005252.1-201ENST00000604518 1063 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AC010245.2-201ENST00000606908 1167 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AC000068.2-201ENST00000608816 460 ntBASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VPS29Q9UBQ0 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms