Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AC004076.2-201ENST00000620532 3323 ntBASIC5.82□□□□□ -1.48
NXF3Q9H4D5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NXF3Q9H4D5 AL359715.3-201ENST00000569267 2123 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AL132656.3-201ENST00000606384 1595 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 MIR105-1-201ENST00000385222 81 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 MIR765-201ENST00000390226 114 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 RN7SKP213-201ENST00000410746 298 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC017078.1-201ENST00000416146 368 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC058823.1-201ENST00000485315 474 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC090058.1-201ENST00000498788 435 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC022832.1-201ENST00000530718 645 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 YWHABP2-201ENST00000540201 713 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 RN7SL356P-201ENST00000582228 248 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AP001357.1-201ENST00000586304 1053 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 TAS2R6P-201ENST00000605022 826 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC037198.3-201ENST00000616754 526 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NXF3Q9H4D5 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
NXF3Q9H4D5 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AL645927.1-201ENST00000396783 406 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC073465.2-201ENST00000440938 498 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 RPS11P7-201ENST00000442125 465 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 RN7SL610P-201ENST00000463845 291 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 RN7SL826P-201ENST00000479724 288 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC017007.3-201ENST00000479865 435 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC091912.1-201ENST00000511351 248 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 OR4A46P-201ENST00000527255 933 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC093388.1-201ENST00000609166 430 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.8□□□□□ -1.48
NXF3Q9H4D5 AC079097.1-201ENST00000512187 1399 ntBASIC5.8□□□□□ -1.48
NXF3Q9H4D5 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 AC004656.1-201ENST00000568479 4951 ntBASIC5.79□□□□□ -1.48
NXF3Q9H4D5 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 AC120036.2-201ENST00000509729 1474 ntBASIC5.79□□□□□ -1.48
NXF3Q9H4D5 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 AC003973.3-201ENST00000624863 2822 ntBASIC5.79□□□□□ -1.48
NXF3Q9H4D5 RNU1-146P-201ENST00000364015 165 ntBASIC5.79□□□□□ -1.48
NXF3Q9H4D5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
NXF3Q9H4D5 U3.28-201ENST00000391249 210 ntBASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms