Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC008985.1-201ENST00000624169 2239 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 MTTP-208ENST00000511045 3154 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL451064.2-201ENST00000623514 1654 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 MAPK10-343ENST00000641677 2546 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 ARHGAP1-201ENST00000311956 3375 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 DOCK1-201ENST00000280333 6797 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AMPD1-201ENST00000369538 2392 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 Y_RNA.31-201ENST00000362574 102 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 Y_RNA.231-201ENST00000364358 102 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 MIR187-201ENST00000385062 109 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 U8.14-201ENST00000390843 143 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 RPL32P23-201ENST00000397237 405 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 TIMD4-203ENST00000407087 1145 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 RAD23BP1-201ENST00000421404 1227 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 DSTNP5-201ENST00000427921 523 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC083855.1-201ENST00000440041 258 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 DBIL5P2-201ENST00000443827 253 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 CTSLP6-201ENST00000458273 1002 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC135721.2-201ENST00000464237 300 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC104339.1-201ENST00000465478 348 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC100843.1-201ENST00000475372 550 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 RPL7P38-201ENST00000488396 739 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 OR7E99P-201ENST00000505750 922 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 RPL7L1P13-201ENST00000511702 739 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC114797.1-201ENST00000514003 728 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 RNU6-1137P-201ENST00000517073 99 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 CASC19-203ENST00000523510 575 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 OR5B19P-201ENST00000531766 928 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 OR7E87P-201ENST00000532397 929 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC009729.1-201ENST00000548873 1133 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 RPL21P5-201ENST00000554662 472 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 DNM1P33-201ENST00000565222 270 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 RBM22P12-201ENST00000567098 1255 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL627309.6-201ENST00000606857 840 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 pRNA.12-201ENST00000614353 90 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 pRNA.3-201ENST00000615048 90 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC022106.2-201ENST00000620114 757 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 MIR6806-201ENST00000622141 64 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC090617.10-201ENST00000624308 134 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 PAFAH2-201ENST00000374282 3581 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC091940.1-204ENST00000507318 3091 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 GSTM2-204ENST00000369831 1730 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 CPB2-AS1-204ENST00000606991 3218 ntTSL 2 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 IGSF22-205ENST00000513874 4284 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
LRCH3Q96II8 ATP5BP1-201ENST00000411980 1574 ntBASIC8.31□□□□□ -1.08
LRCH3Q96II8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC8.31□□□□□ -1.08
LRCH3Q96II8 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LRCH3Q96II8 GDI2P1-201ENST00000429312 1336 ntBASIC8.3□□□□□ -1.08
LRCH3Q96II8 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LRCH3Q96II8 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.3□□□□□ -1.08
LRCH3Q96II8 WNK1-220ENST00000574564 1401 ntBASIC8.3□□□□□ -1.08
LRCH3Q96II8 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
LRCH3Q96II8 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC8.3□□□□□ -1.08
LRCH3Q96II8 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC8.3□□□□□ -1.08
LRCH3Q96II8 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC8.3□□□□□ -1.08
LRCH3Q96II8 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC8.3□□□□□ -1.08
LRCH3Q96II8 SMG1P1-202ENST00000309865 4223 ntBASIC8.3□□□□□ -1.08
LRCH3Q96II8 FAM122C-211ENST00000623326 2064 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LRCH3Q96II8 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC8.3□□□□□ -1.08
LRCH3Q96II8 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
LRCH3Q96II8 AC006141.1-201ENST00000581917 2170 ntBASIC8.3□□□□□ -1.08
LRCH3Q96II8 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms