Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 GSTA12P-201ENST00000402398 508 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC099670.2-201ENST00000435130 321 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 NPM1P29-201ENST00000483112 803 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 snoU109.5-201ENST00000516231 132 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 SCARNA18.1-201ENST00000516330 83 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 RNA5SP340-201ENST00000517132 107 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC138832.1-201ENST00000522871 556 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC096708.4-201ENST00000620563 552 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 AC022400.9-201ENST00000623633 273 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 DDX18P3-201ENST00000404856 2007 ntBASIC5.63□□□□□ -1.51
VMP1Q96GC9 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
VMP1Q96GC9 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
VMP1Q96GC9 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 OR10R3P-201ENST00000361688 942 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 NCSTNP1-201ENST00000406229 144 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 RPA2P2-201ENST00000419698 796 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AL356806.1-201ENST00000422524 916 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 RNF19BPX-201ENST00000426224 625 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 KCTD9P1-201ENST00000430462 1167 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 DNAJA1P5-201ENST00000440278 943 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 EIF5AP4-201ENST00000441206 465 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AL445466.1-201ENST00000448432 357 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 NDUFA5P5-201ENST00000468361 342 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC094085.1-201ENST00000468914 584 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AK5-208ENST00000478255 556 ntTSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC034244.2-201ENST00000514668 858 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 RNA5SP228-201ENST00000516232 133 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 OR4A43P-201ENST00000532938 908 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC090888.3-201ENST00000558917 509 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AP005119.1-201ENST00000580956 292 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC005244.1-201ENST00000582566 339 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC060780.2-201ENST00000589047 198 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AL357562.1-201ENST00000624911 609 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 AL138820.1-201ENST00000617901 5305 ntBASIC5.62□□□□□ -1.51
VMP1Q96GC9 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
VMP1Q96GC9 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VMP1Q96GC9 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VMP1Q96GC9 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms