Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 BMS1P7-201ENST00000602440 1052 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC011458.1-201ENST00000604034 617 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC093388.1-201ENST00000609166 430 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 MIR1264-201ENST00000616374 69 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AC010872.1-201ENST00000624225 675 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 NEPNP-201ENST00000404786 1371 ntBASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
CHMP4CQ96CF2 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 NLRP3P1-201ENST00000622303 1785 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 MSL3P1-202ENST00000440028 1468 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 OR52B3P-201ENST00000314715 928 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 UQCRFS1P3-201ENST00000407697 385 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RNU1-88P-201ENST00000459274 128 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 snoU13.29-201ENST00000459370 104 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RPSAP37-201ENST00000470913 821 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 PDCL3P4-201ENST00000489621 720 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 MTATP6P1-201ENST00000514057 681 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RNA5SP271-201ENST00000516700 88 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 IGKV2-19-201ENST00000518132 283 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 MTND5P21-201ENST00000531961 522 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC006530.1-201ENST00000555980 571 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 WDR61-205ENST00000558459 884 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC005244.1-201ENST00000582566 339 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC006116.7-201ENST00000590141 756 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AP003117.1-201ENST00000602771 554 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 NANOGP3-201ENST00000605855 286 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RNU6-84P-201ENST00000607737 102 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AC105105.5-201ENST00000622635 1294 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 AL049777.1-201ENST00000622740 518 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RBPJP7-201ENST00000442803 1447 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 RBPJP5-201ENST00000449433 1447 ntBASIC7.01□□□□□ -1.29
CHMP4CQ96CF2 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC068870.3-201ENST00000625077 2536 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AL442128.2-201ENST00000620246 1824 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 MGP-201ENST00000228938 694 ntTSL 3 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 TMSB4XP4-201ENST00000323496 618 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 RNU6-925P-201ENST00000384629 104 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC245060.4-201ENST00000413293 1121 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 MORF4L1P7-201ENST00000426038 703 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AL590399.2-201ENST00000427536 309 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 PPIAP20-201ENST00000449839 135 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 RSU1P1-201ENST00000453416 441 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC023245.1-201ENST00000468501 517 ntBASIC7□□□□□ -1.29
CHMP4CQ96CF2 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7□□□□□ -1.29
CHMP4CQ96CF2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC7□□□□□ -1.29
CHMP4CQ96CF2 MTATP6P9-201ENST00000515039 680 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 138.1 ms