Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS3Q969F9 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HPS3Q969F9 RN7SKP78-201ENST00000364711 318 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 RN7SKP15-201ENST00000364742 309 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS3Q969F9 MIR122-201ENST00000385044 85 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 OR2W4P-201ENST00000406496 926 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS3Q969F9 GAPDHP48-201ENST00000436626 961 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS3Q969F9 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS3Q969F9 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS3Q969F9 RNA5SP438-201ENST00000516561 112 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 BUD31P1-201ENST00000521828 359 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC027369.2-201ENST00000528030 440 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AC005363.1-201ENST00000530779 351 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AC006530.1-201ENST00000555980 571 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 RPA2P1-201ENST00000556557 721 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.5□□□□□ -1.37
HPS3Q969F9 CD24P2-201ENST00000565486 219 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC002310.3-201ENST00000569728 723 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 MIR4776-2-201ENST00000580204 80 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS3Q969F9 EIF1P5-201ENST00000585002 234 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AL050303.3-201ENST00000613704 284 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.5□□□□□ -1.37
HPS3Q969F9 AC013437.2-201ENST00000639587 677 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.5□□□□□ -1.37
HPS3Q969F9 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HPS3Q969F9 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HPS3Q969F9 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.5□□□□□ -1.37
HPS3Q969F9 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 AP004607.3-201ENST00000530354 3915 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC245100.2-201ENST00000454544 1679 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AC020633.1-201ENST00000468439 2247 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.49□□□□□ -1.37
HPS3Q969F9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HPS3Q969F9 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
HPS3Q969F9 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
HPS3Q969F9 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HPS3Q969F9 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HPS3Q969F9 RNA5SP477-201ENST00000362639 119 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HPS3Q969F9 RNU6-31P-201ENST00000384388 108 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 RNA5SP122-201ENST00000384457 108 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HPS3Q969F9 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.49□□□□□ -1.37
HPS3Q969F9 BX119904.1-201ENST00000432026 348 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AL389925.1-201ENST00000432257 728 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.49□□□□□ -1.37
HPS3Q969F9 DNAJC19P5-201ENST00000443295 316 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AL606517.1-201ENST00000446914 387 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 FRG2FP-204ENST00000453982 852 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 RPL12P39-201ENST00000455456 496 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 RPL5P13-201ENST00000462840 709 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 GTF2IP9-201ENST00000502460 301 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AC010460.2-201ENST00000509054 677 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AC090568.1-201ENST00000509499 856 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AC114781.3-201ENST00000512083 142 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 Y_RNA.667-201ENST00000516212 107 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 snoU109.5-201ENST00000516231 132 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC087894.1-201ENST00000538359 518 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AC068305.2-201ENST00000550567 1205 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.49□□□□□ -1.37
HPS3Q969F9 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AL159169.2-201ENST00000610061 1269 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC093875.1-201ENST00000623688 504 ntBASIC6.49□□□□□ -1.37
HPS3Q969F9 BANCR-201ENST00000624238 473 ntTSL 2 BASIC6.49□□□□□ -1.37
HPS3Q969F9 AC099654.8-201ENST00000637757 681 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms