Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 MRRFP1-201ENST00000435941 1675 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 RAB5CP1-201ENST00000395972 580 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 RPL21P67-201ENST00000402896 478 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 COX5BP7-201ENST00000414780 274 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 PCNPP4-201ENST00000414817 517 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC006335.2-201ENST00000437993 330 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AL138899.2-201ENST00000439139 499 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 GAPDHP14-201ENST00000450472 937 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 PRPF38AP1-201ENST00000451976 933 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 LRRC37A14P-201ENST00000452297 462 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC084754.1-201ENST00000463466 464 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 EIF3KP3-201ENST00000514461 639 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 CYCSP22-201ENST00000517555 339 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC130364.2-201ENST00000528639 604 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC040958.1-201ENST00000561102 201 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 MIR193BHG-214ENST00000641765 509 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AC091305.2-201ENST00000624049 1576 ntBASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RTN4IP1Q8WWV3 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 SRRM1P3-201ENST00000426911 2678 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AL450345.1-202ENST00000605741 3881 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 RNA5SP131-201ENST00000365452 119 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 OR2AT2P-201ENST00000413438 905 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 RPL34P3-201ENST00000421454 338 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC007161.1-204ENST00000423039 460 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 KCTD9P1-201ENST00000430462 1167 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC005297.1-201ENST00000444765 862 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 NPM1P19-201ENST00000450070 712 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC245028.2-201ENST00000458673 253 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 USP9YP2-201ENST00000504503 1000 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 IMPA1P1-201ENST00000510718 842 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 USP9YP1-201ENST00000513521 1002 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 SCARNA20.4-201ENST00000516969 131 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 SNORA43.3-201ENST00000517240 103 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 FTH1P11-201ENST00000517577 551 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC027026.1-201ENST00000532323 742 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC027243.2-201ENST00000602530 724 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 AC073869.8-201ENST00000641806 335 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 OR13C1P-202ENST00000641378 2919 ntBASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
RTN4IP1Q8WWV3 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms