Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.82□□□□□ -1.16
NEDD1Q8NHV4 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.82□□□□□ -1.16
NEDD1Q8NHV4 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEDD1Q8NHV4 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.82□□□□□ -1.16
NEDD1Q8NHV4 CSNK1A1-204ENST00000504676 1772 ntTSL 2 BASIC7.82□□□□□ -1.16
NEDD1Q8NHV4 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
NEDD1Q8NHV4 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC007993.1-201ENST00000621298 2430 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 BX322650.1-201ENST00000332359 2143 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 RNU4-21P-201ENST00000362802 126 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 MRPS6P2-201ENST00000381143 370 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC121334.1-201ENST00000396414 802 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 VN1R12P-201ENST00000403778 876 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 RPL7AP51-201ENST00000422016 760 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC013410.1-201ENST00000436223 1232 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC096632.2-201ENST00000438139 1239 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC008280.2-201ENST00000455473 307 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC117395.1-201ENST00000487390 403 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 OR9N1P-202ENST00000494289 481 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 OR7E157P-201ENST00000494376 911 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 MAST4-IT1-201ENST00000514241 658 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 RNU6-506P-201ENST00000516553 94 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 LINC01493-202ENST00000533575 581 ntTSL 4 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC022662.1-201ENST00000580252 331 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC083899.3-201ENST00000603413 594 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC079880.2-201ENST00000603790 1213 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AL391497.1-201ENST00000608671 547 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AL445423.1-201ENST00000609941 536 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC055764.2-201ENST00000610089 670 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.812-201ENST00000610788 101 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.784-201ENST00000613803 101 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.787-201ENST00000616522 101 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.780-201ENST00000617336 101 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.801-201ENST00000619005 101 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 RACK1-235ENST00000626067 564 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC073488.9-201ENST00000631601 754 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 OR5H6-203ENST00000642105 978 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC107884.1-202ENST00000622955 2703 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ZNF812P-202ENST00000536819 1890 ntTSL 2 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC131971.1-201ENST00000332881 1482 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AL450327.1-201ENST00000430931 2632 ntTSL 5 BASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 AC089998.1-201ENST00000548575 3141 ntBASIC7.81□□□□□ -1.16
NEDD1Q8NHV4 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 NEK2P2-201ENST00000438441 1338 ntBASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 AC012213.2-201ENST00000562917 4597 ntBASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 LINC02275-201ENST00000508313 4365 ntTSL 2 BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 PRDX6-201ENST00000340385 1751 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 RNU5B-1-201ENST00000363286 116 ntBASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 Y_RNA.326-201ENST00000365176 113 ntBASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 SNORA64.3-201ENST00000365647 134 ntBASIC7.8□□□□□ -1.16
NEDD1Q8NHV4 MIR421-201ENST00000365696 85 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms