Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 ERVFRD-3-201ENST00000578561 1617 ntBASIC8.19□□□□□ -1.1
VPS8Q8N3P4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 SNORA48.4-201ENST00000391089 134 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AC211486.3-201ENST00000412694 621 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 BX323845.1-201ENST00000432417 179 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 RPL7P40-201ENST00000481703 745 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 IGHVII-44-2-201ENST00000517728 250 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AC087763.1-201ENST00000603391 286 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 AC099494.2-201ENST00000623371 978 ntBASIC8.18□□□□□ -1.1
VPS8Q8N3P4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
VPS8Q8N3P4 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC007342.5-201ENST00000571340 2142 ntBASIC8.17□□□□□ -1.1
VPS8Q8N3P4 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 DNAJA1P4-201ENST00000406473 1166 ntBASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC021193.1-201ENST00000511607 420 ntBASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC012400.1-201ENST00000518452 381 ntBASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC027369.5-201ENST00000533838 755 ntBASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
VPS8Q8N3P4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AL137058.3-201ENST00000624531 3099 ntBASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 RNA5SP241-201ENST00000391326 114 ntBASIC8.16□□□□□ -1.1
VPS8Q8N3P4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 RPS27AP6-201ENST00000427962 448 ntBASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AL161722.2-201ENST00000434731 981 ntBASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AC046176.1-201ENST00000435260 1170 ntBASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AC109462.1-201ENST00000491087 368 ntBASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
VPS8Q8N3P4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 HNRNPA1P29-201ENST00000426409 879 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 AC005412.2-201ENST00000492004 341 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 OR5M14P-201ENST00000506803 618 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 AC009163.6-201ENST00000612367 342 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 AC135068.12-201ENST00000637370 931 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 CASC19-222ENST00000641321 1173 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 MAPK10-304ENST00000641341 3984 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 HSPA8P18-201ENST00000439846 1928 ntBASIC8.15□□□□□ -1.1
VPS8Q8N3P4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
VPS8Q8N3P4 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
VPS8Q8N3P4 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC8.15□□□□□ -1.11
VPS8Q8N3P4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
VPS8Q8N3P4 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
VPS8Q8N3P4 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 NXF4-202ENST00000416098 1465 ntBASIC8.14□□□□□ -1.11
VPS8Q8N3P4 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 PLEKHG1-201ENST00000358517 7138 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 RNA5SP305-201ENST00000362665 119 ntBASIC8.14□□□□□ -1.11
VPS8Q8N3P4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 RPS29P10-201ENST00000439197 166 ntBASIC8.14□□□□□ -1.11
VPS8Q8N3P4 RPL7AP61-201ENST00000443410 636 ntBASIC8.14□□□□□ -1.11
VPS8Q8N3P4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC8.14□□□□□ -1.11
VPS8Q8N3P4 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms