Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AC083899.1-201ENST00000454465 3819 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 MTCO1P7-201ENST00000419523 1542 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AC107977.1-201ENST00000355745 939 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 MIR375-201ENST00000362103 64 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 RN7SL741P-201ENST00000482473 289 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 NPM1P29-201ENST00000483112 803 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 RN7SL649P-201ENST00000496974 275 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 KATNBL1P4-201ENST00000503545 918 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AC021106.1-201ENST00000509020 1058 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 DPPA2P4-201ENST00000563717 878 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AP005403.1-201ENST00000579720 229 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 AP005431.1-201ENST00000618479 319 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 uc_338.7-201ENST00000621834 124 ntBASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC50Q8IVM0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC000374.1-201ENST00000434698 1745 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC003973.3-201ENST00000624863 2822 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LYPLA1P3-201ENST00000402650 695 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 RPS3AP2-201ENST00000407190 754 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 RN7SKP240-201ENST00000410583 375 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC007161.1-204ENST00000423039 460 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 DNAJA1P5-201ENST00000440278 943 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AP000547.1-201ENST00000454360 617 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 UBFD1P1-201ENST00000473259 814 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC091912.1-201ENST00000511351 248 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC021193.1-201ENST00000511607 420 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 RNU6-615P-201ENST00000516065 106 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC010809.3-201ENST00000621310 641 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC091305.2-201ENST00000624049 1576 ntBASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC50Q8IVM0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC50Q8IVM0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC50Q8IVM0 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC50Q8IVM0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC50Q8IVM0 RNA5SP394-201ENST00000364216 119 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms