Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CROCCP3Q8IVE0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.05□□□□□ -1.6
CROCCP3Q8IVE0 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AP004607.3-201ENST00000530354 3915 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 OR51H2P-202ENST00000641424 3046 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC010132.2-201ENST00000295493 1043 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RNA5SP427-201ENST00000365323 119 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AL589655.1-201ENST00000405398 482 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AL360013.1-201ENST00000419031 858 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RPS4XP5-201ENST00000419038 768 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CENPN-204ENST00000428963 971 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC094019.1-201ENST00000434678 472 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AL445928.1-201ENST00000435545 222 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RPS19P6-201ENST00000441327 433 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC023141.8-201ENST00000442554 208 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CXCR2P1-202ENST00000443392 1074 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 ZNF619P1-201ENST00000446539 752 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 VN1R48P-201ENST00000448149 1036 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RPS6P2-201ENST00000454208 705 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC089999.1-201ENST00000460336 374 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 MIR378H-201ENST00000579966 83 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 MIMT1-201ENST00000597105 1050 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 SNORD91B-202ENST00000608459 222 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AL133370.2-201ENST00000619934 439 ntBASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 MBD5-221ENST00000637159 902 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.04□□□□□ -1.6
CROCCP3Q8IVE0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 RNA5SP485-201ENST00000365053 119 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 RNA5SP105-201ENST00000391123 113 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 MIR1231-201ENST00000408101 92 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 CYCSP10-201ENST00000417973 294 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 GLUD1P9-201ENST00000420997 1173 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 OSTCP4-201ENST00000424397 449 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC046176.1-201ENST00000435260 1170 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 PHBP4-201ENST00000437447 837 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 SEPT14P12-201ENST00000442280 560 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 FTLP8-201ENST00000446770 267 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 MTND5P8-201ENST00000449817 1083 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 RN7SL515P-201ENST00000463999 297 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC112206.1-201ENST00000468416 477 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC008629.2-201ENST00000503783 483 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 IMPA1P1-201ENST00000510718 842 ntBASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.03□□□□□ -1.6
CROCCP3Q8IVE0 AC091912.1-201ENST00000511351 248 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms