Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RFWD3Q6PCD5 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC010266.2-201ENST00000564741 3255 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC009804.1-201ENST00000400949 179 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 HYALP1-201ENST00000417674 1279 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC117434.1-201ENST00000419971 836 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 BX510359.3-201ENST00000422168 306 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 BLNK-209ENST00000495266 440 ntTSL 5 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 NPM1P21-201ENST00000513394 762 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 GAPDHP62-201ENST00000515313 990 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC090022.1-201ENST00000546569 311 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AL022394.1-201ENST00000606979 292 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC136428.4-201ENST00000634254 1155 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 AC007938.2-201ENST00000604666 2634 ntBASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFWD3Q6PCD5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AL360270.2-201ENST00000562952 5985 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 NR1H5P-201ENST00000452683 1377 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 RNF10P1-201ENST00000418589 369 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 MARK2P12-201ENST00000420129 585 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 CYCSP6-201ENST00000434498 302 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AC011225.1-201ENST00000457751 369 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 RPS4XP1-201ENST00000482189 787 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 ATP5LP5-201ENST00000483050 299 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 RN7SL629P-201ENST00000489622 285 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 OR5AM1P-201ENST00000532136 1032 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AC122688.1-201ENST00000541494 223 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 AC092376.2-201ENST00000622621 4116 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 OR4F13P-202ENST00000560066 2054 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 LINC01963-201ENST00000562038 3148 ntBASIC5.68□□□□□ -1.5
RFWD3Q6PCD5 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 HCFC2P1-201ENST00000392864 1592 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AL353796.1-201ENST00000561542 3241 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 AC003985.2-201ENST00000562268 1669 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 MTCO1P46-201ENST00000451639 1491 ntBASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFWD3Q6PCD5 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.2 ms