Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC091305.2-201ENST00000624049 1576 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 OR56A4-201ENST00000330728 1209 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 RNA5SP122-201ENST00000384457 108 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 RNA5SP284-201ENST00000384547 118 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC098592.2-201ENST00000413158 265 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC117434.1-201ENST00000419971 836 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 NPM1P18-201ENST00000434232 732 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 RAB9AP5-201ENST00000437794 597 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC002504.1-201ENST00000438281 691 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 RAB9AP2-201ENST00000443911 597 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 EEF1B2P6-201ENST00000445713 673 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 VDAC2P4-201ENST00000452925 711 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 UBFD1P1-201ENST00000473259 814 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC007998.1-201ENST00000474156 672 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC079064.1-201ENST00000528365 362 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC02019-201ENST00000608605 2060 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 AC008079.2-201ENST00000623543 20396 ntBASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
HIST2H2AA3Q6FI13 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC005261.6-201ENST00000623072 1387 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 MAPK10-338ENST00000641647 3362 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 SNORA5.1-201ENST00000384275 131 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 TNPO1P1-201ENST00000423641 1138 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 NDUFB4P8-201ENST00000435351 367 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 OR6D1P-201ENST00000436165 939 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 RPL23AP19-201ENST00000436229 369 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC092106.1-201ENST00000444291 373 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AL450023.1-201ENST00000450868 751 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC083899.1-201ENST00000454465 3819 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC022826.1-201ENST00000519383 805 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC010547.6-201ENST00000571789 193 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 MIR4505-201ENST00000582238 73 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 AL359715.3-201ENST00000569267 2123 ntBASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HIST2H2AA3Q6FI13 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms