Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 EIF3KP3-201ENST00000514461 639 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 SCARNA20.4-201ENST00000516969 131 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 IGKV3D-25-201ENST00000519599 235 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 RN7SL435P-201ENST00000584418 282 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC108738.1-201ENST00000603703 237 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC233280.2-201ENST00000603917 1070 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC087283.1-201ENST00000604029 1074 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AL133406.3-201ENST00000606817 541 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AC007603.3-201ENST00000636915 979 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AL596275.2-207ENST00000641188 675 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AL596275.2-204ENST00000641628 552 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 AL596275.2-206ENST00000641957 626 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 TET1P1-201ENST00000426627 2301 ntBASIC4.87□□□□□ -1.63
CCDC58Q4VC31 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CCDC58Q4VC31 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 LINC01109-201ENST00000603837 3081 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 RNA5SP500-201ENST00000364486 119 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 PCNPP4-201ENST00000414817 517 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC104843.2-201ENST00000427666 297 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 BX119321.1-201ENST00000428912 797 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AL356121.1-201ENST00000442911 156 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 PRPF38AP1-201ENST00000451976 933 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 IGBP1P4-201ENST00000503202 879 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 ARL4AP1-201ENST00000503220 705 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 NACAP5-201ENST00000509863 636 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 RNU2-45P-201ENST00000516068 187 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC092709.1-201ENST00000521355 1045 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 HSPE1P2-201ENST00000554777 306 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 FAM27E4-201ENST00000605259 342 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC073869.8-201ENST00000641806 335 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 LINC01963-201ENST00000562038 3148 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 AC091305.2-201ENST00000624049 1576 ntBASIC4.86□□□□□ -1.63
CCDC58Q4VC31 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC58Q4VC31 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AL354890.1-201ENST00000413730 346 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 MARK2P12-201ENST00000420129 585 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AL022331.1-201ENST00000429025 477 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 RPSAP32-201ENST00000432681 526 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 PNKDP1-201ENST00000435914 430 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC023194.2-201ENST00000465398 406 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCDC58Q4VC31 OR9N1P-201ENST00000491296 333 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 RPS12P31-201ENST00000491419 398 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 RN7SL193P-201ENST00000491708 276 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC091874.2-201ENST00000505889 720 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 AC113430.1-201ENST00000506872 718 ntBASIC4.85□□□□□ -1.63
CCDC58Q4VC31 IMPA1P1-201ENST00000510718 842 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms