Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 YWHABP2-201ENST00000540201 713 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 RPL10P14-201ENST00000565265 298 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 RN7SL290P-201ENST00000578661 300 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC125494.2-201ENST00000602431 657 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC005840.5-201ENST00000619166 599 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 MTCO1P1-201ENST00000624263 1081 ntBASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PTPN20Q4JDL3 AC079298.1-201ENST00000625026 1619 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AP001029.2-203ENST00000589795 4910 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AL121776.1-201ENST00000429337 372 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC124944.2-201ENST00000429866 1242 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 CYCSP6-201ENST00000434498 302 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC016724.1-201ENST00000453215 421 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 RN7SL423P-201ENST00000486202 304 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 RPL15P21-201ENST00000495592 567 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 RPS26P24-201ENST00000497656 331 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 IMPA1P1-201ENST00000510718 842 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 RNU6-941P-201ENST00000516346 108 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 RNA5SP373-201ENST00000517271 95 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 HMGB1P40-201ENST00000525121 540 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AC079395.2-201ENST00000610982 737 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AL049767.1-202ENST00000637826 242 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.63□□□□□ -1.51
PTPN20Q4JDL3 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 AC005005.4-201ENST00000623789 16698 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 U3.23-201ENST00000391132 200 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 RNA5SP241-201ENST00000391326 114 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 AC009804.1-201ENST00000400949 179 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 NPM1P37-201ENST00000403105 874 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 MRPS21P2-201ENST00000424704 264 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 AC016772.1-201ENST00000444170 1261 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 CBX1P5-201ENST00000475330 559 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 RPS12P31-201ENST00000491419 398 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 AC011445.2-201ENST00000599274 173 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PTPN20Q4JDL3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 AC005261.2-201ENST00000593427 4258 ntBASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 OR9G4-201ENST00000302957 984 ntBASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 RNU1-146P-201ENST00000364015 165 ntBASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 MIR143-201ENST00000385300 106 ntBASIC5.61□□□□□ -1.51
PTPN20Q4JDL3 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 131 ms