Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 RNU1-59P-201ENST00000364829 162 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC058823.1-201ENST00000485315 474 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC112184.1-201ENST00000505179 312 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC008126.1-201ENST00000549019 480 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 OR11H3P-201ENST00000554547 982 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC009237.13-201ENST00000603193 276 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 NANOGP3-201ENST00000605855 286 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 RNU6-84P-201ENST00000607737 102 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 U1.25-201ENST00000614085 162 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AL031658.2-201ENST00000616850 651 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 U1.34-201ENST00000618578 162 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 U1.31-201ENST00000620022 160 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC135068.5-201ENST00000624197 983 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC097063.1-201ENST00000426714 1797 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC023421.1-201ENST00000590535 1785 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AC093909.5-201ENST00000621839 1799 ntBASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.35□□□□□ -1.39
SHROOM1Q2M3G4 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 EEF1A1P14-201ENST00000421195 1376 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AL078621.3-201ENST00000623707 2042 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 RPS26P38-201ENST00000414476 348 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 Z80107.2-201ENST00000445127 392 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 RNU7-157P-201ENST00000459600 66 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 HMGB1P44-201ENST00000508597 572 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AC122688.1-201ENST00000541494 223 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AP000619.2-201ENST00000546014 969 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 NPM1P42-201ENST00000560329 862 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AC090527.3-201ENST00000619041 548 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 AC006206.1-201ENST00000544842 3387 ntBASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SHROOM1Q2M3G4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
SHROOM1Q2M3G4 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
SHROOM1Q2M3G4 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
SHROOM1Q2M3G4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 MIR550A3-201ENST00000390735 95 ntBASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AC009127.1-201ENST00000467090 155 ntBASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 SNRPCP2-201ENST00000504370 475 ntBASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 AL136295.6-201ENST00000610486 658 ntBASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 TANK-205ENST00000405852 2155 ntTSL 5 BASIC6.33□□□□□ -1.4
SHROOM1Q2M3G4 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SHROOM1Q2M3G4 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms