Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC003973.3-201ENST00000624863 2822 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 MT-RNR2-201ENST00000387347 1559 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CX3CL1P78423 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CX3CL1P78423 MIR130B-202ENST00000385018 82 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 ATP5HP3-201ENST00000396994 486 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 PEX12P1-201ENST00000400284 1048 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 TATDN1P1-201ENST00000414123 891 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AL606495.1-201ENST00000422100 813 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 RPS3AP38-201ENST00000435889 763 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.75□□□□□ -1.65
CX3CL1P78423 RPSAP40-201ENST00000442343 891 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AL445466.1-201ENST00000448432 357 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 HMGB1P5-202ENST00000451497 985 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 SDC4P-201ENST00000453285 601 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 PSMC1P13-201ENST00000458195 985 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC104164.1-201ENST00000460282 590 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 RN7SL168P-201ENST00000463821 279 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC107398.1-201ENST00000486904 505 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC112198.4-201ENST00000515450 351 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC011853.1-201ENST00000518911 454 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 C1DP5-201ENST00000525775 383 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC006512.2-201ENST00000543250 486 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AL049779.3-201ENST00000557141 606 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AP005119.1-201ENST00000580956 292 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AP001437.1-201ENST00000608783 456 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AP000240.1-201ENST00000609910 452 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC4.75□□□□□ -1.65
CX3CL1P78423 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC096708.4-201ENST00000620563 552 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 AL445528.2-201ENST00000620582 470 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC007342.7-201ENST00000624610 2337 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC133552.1-201ENST00000569988 4007 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC004076.2-201ENST00000620532 3323 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CX3CL1P78423 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 UGT2B26P-201ENST00000508672 1613 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 AC012254.3-201ENST00000591183 2117 ntBASIC4.75□□□□□ -1.65
CX3CL1P78423 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CX3CL1P78423 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC4.74□□□□□ -1.65
CX3CL1P78423 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
CX3CL1P78423 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 PSG10P-201ENST00000501199 1500 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 AP000473.2-201ENST00000602659 1537 ntBASIC4.74□□□□□ -1.65
CX3CL1P78423 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CX3CL1P78423 COX6B1P3-201ENST00000312310 260 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms