Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.99□□□□□ -1.45
HDAC4P56524 RNA5SP271-201ENST00000516700 88 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 AL121839.1-201ENST00000556233 1185 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF322P1-201ENST00000568013 1209 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.99□□□□□ -1.45
HDAC4P56524 HIRAP1-201ENST00000605318 787 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 WBP1LP8-201ENST00000617401 327 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AC009032.1-201ENST00000617574 431 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AL162233.1-201ENST00000620014 944 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AL035661.1-201ENST00000620459 1144 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 AC026124.2-201ENST00000621847 656 ntBASIC5.99□□□□□ -1.45
HDAC4P56524 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.99□□□□□ -1.45
HDAC4P56524 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
HDAC4P56524 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.99□□□□□ -1.45
HDAC4P56524 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
HDAC4P56524 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HDAC4P56524 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HDAC4P56524 AL589655.1-201ENST00000405398 482 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.98□□□□□ -1.45
HDAC4P56524 METTL15P3-201ENST00000415522 1221 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 NIFKP3-201ENST00000417799 865 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AL121878.1-201ENST00000418638 859 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AK4P4-201ENST00000419465 646 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.98□□□□□ -1.45
HDAC4P56524 LYPLA1P1-201ENST00000434514 622 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC011476.1-201ENST00000466725 307 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 RPL32P33-201ENST00000487023 394 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.98□□□□□ -1.45
HDAC4P56524 DUTP1-201ENST00000493631 470 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.98□□□□□ -1.45
HDAC4P56524 SCARNA6.1-201ENST00000516989 238 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.98□□□□□ -1.45
HDAC4P56524 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 AC008126.1-201ENST00000549019 480 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.98□□□□□ -1.45
HDAC4P56524 AC012414.2-201ENST00000559474 187 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 MIR4260-201ENST00000583107 67 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.98□□□□□ -1.45
HDAC4P56524 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.98□□□□□ -1.45
HDAC4P56524 AP005431.1-201ENST00000618479 319 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 AC020978.9-201ENST00000624380 1141 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.98□□□□□ -1.45
HDAC4P56524 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
HDAC4P56524 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.98□□□□□ -1.45
HDAC4P56524 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 AL158152.1-201ENST00000602652 1435 ntBASIC5.98□□□□□ -1.45
HDAC4P56524 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
HDAC4P56524 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
HDAC4P56524 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
HDAC4P56524 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
HDAC4P56524 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HDAC4P56524 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 RNA5SP453-201ENST00000362503 119 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
HDAC4P56524 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HDAC4P56524 RN7SKP206-201ENST00000410823 293 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC245060.4-201ENST00000413293 1121 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.97□□□□□ -1.45
HDAC4P56524 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.97□□□□□ -1.45
HDAC4P56524 CR848007.2-201ENST00000424918 787 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC127526.2-201ENST00000426436 775 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.97□□□□□ -1.45
HDAC4P56524 RPS29P14-201ENST00000431518 171 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.97□□□□□ -1.45
HDAC4P56524 AP006222.1-205ENST00000450734 457 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 RN7SL570P-201ENST00000484405 292 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC104109.1-201ENST00000498563 436 ntBASIC5.97□□□□□ -1.45
HDAC4P56524 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms