Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 MIR4691-201ENST00000583764 85 ntBASIC7.5□□□□□ -1.21
MSH6P52701 H3F3BP2-201ENST00000583907 357 ntBASIC7.5□□□□□ -1.21
MSH6P52701 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.5□□□□□ -1.21
MSH6P52701 AC015660.5-201ENST00000623238 564 ntBASIC7.5□□□□□ -1.21
MSH6P52701 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MSH6P52701 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MSH6P52701 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC7.5□□□□□ -1.21
MSH6P52701 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.5□□□□□ -1.21
MSH6P52701 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
MSH6P52701 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.5□□□□□ -1.21
MSH6P52701 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
MSH6P52701 AC034229.2-201ENST00000566945 2508 ntBASIC7.5□□□□□ -1.21
MSH6P52701 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.5□□□□□ -1.21
MSH6P52701 AC018809.2-201ENST00000602436 3823 ntBASIC7.5□□□□□ -1.21
MSH6P52701 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC7.5□□□□□ -1.21
MSH6P52701 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
MSH6P52701 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 MTND4LP17-201ENST00000414607 293 ntBASIC7.49□□□□□ -1.21
MSH6P52701 AC012519.1-201ENST00000424588 610 ntBASIC7.49□□□□□ -1.21
MSH6P52701 RPL18P10-201ENST00000425606 538 ntBASIC7.49□□□□□ -1.21
MSH6P52701 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC7.49□□□□□ -1.21
MSH6P52701 AC079080.1-201ENST00000479841 822 ntBASIC7.49□□□□□ -1.21
MSH6P52701 RPS7P6-201ENST00000485777 579 ntBASIC7.49□□□□□ -1.21
MSH6P52701 AC026979.1-201ENST00000492525 396 ntBASIC7.49□□□□□ -1.21
MSH6P52701 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.49□□□□□ -1.21
MSH6P52701 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC7.49□□□□□ -1.21
MSH6P52701 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC7.49□□□□□ -1.21
MSH6P52701 UBE2FP2-201ENST00000566646 462 ntBASIC7.49□□□□□ -1.21
MSH6P52701 AP005403.1-201ENST00000579720 229 ntBASIC7.49□□□□□ -1.21
MSH6P52701 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.49□□□□□ -1.21
MSH6P52701 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
MSH6P52701 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC7.49□□□□□ -1.21
MSH6P52701 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC7.49□□□□□ -1.21
MSH6P52701 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.49□□□□□ -1.21
MSH6P52701 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC7.49□□□□□ -1.21
MSH6P52701 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
MSH6P52701 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC7.48□□□□□ -1.21
MSH6P52701 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.48□□□□□ -1.21
MSH6P52701 CDC123-202ENST00000378900 933 ntTSL 5 BASIC7.48□□□□□ -1.21
MSH6P52701 MIR105-1-201ENST00000385222 81 ntBASIC7.48□□□□□ -1.21
MSH6P52701 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 CHEK2P3-201ENST00000416118 248 ntBASIC7.48□□□□□ -1.21
MSH6P52701 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC7.48□□□□□ -1.21
MSH6P52701 AC068287.1-201ENST00000430283 295 ntBASIC7.48□□□□□ -1.21
MSH6P52701 RPL12P17-201ENST00000432393 498 ntBASIC7.48□□□□□ -1.21
MSH6P52701 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC7.48□□□□□ -1.21
MSH6P52701 AC012512.1-201ENST00000446594 718 ntBASIC7.48□□□□□ -1.21
MSH6P52701 NDUFA5P8-201ENST00000449019 346 ntBASIC7.48□□□□□ -1.21
MSH6P52701 CYCSP42-201ENST00000450823 238 ntBASIC7.48□□□□□ -1.21
MSH6P52701 OSTCP1-201ENST00000455507 450 ntBASIC7.48□□□□□ -1.21
MSH6P52701 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7.48□□□□□ -1.21
MSH6P52701 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC7.48□□□□□ -1.21
MSH6P52701 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.48□□□□□ -1.21
MSH6P52701 PARP1P2-201ENST00000556806 195 ntBASIC7.48□□□□□ -1.21
MSH6P52701 TEX41-238ENST00000604253 709 ntTSL 5 BASIC7.48□□□□□ -1.21
MSH6P52701 AC073365.1-203ENST00000641055 1992 ntBASIC7.48□□□□□ -1.21
MSH6P52701 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC7.48□□□□□ -1.21
MSH6P52701 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.48□□□□□ -1.21
MSH6P52701 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
MSH6P52701 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.48□□□□□ -1.21
MSH6P52701 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
MSH6P52701 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 RNA5SP455-201ENST00000365190 119 ntBASIC7.47□□□□□ -1.21
MSH6P52701 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC7.47□□□□□ -1.21
MSH6P52701 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC7.47□□□□□ -1.21
MSH6P52701 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC7.47□□□□□ -1.21
MSH6P52701 KRTAP5-14P-201ENST00000502328 121 ntBASIC7.47□□□□□ -1.21
MSH6P52701 BTF3P13-201ENST00000513224 490 ntBASIC7.47□□□□□ -1.21
MSH6P52701 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.47□□□□□ -1.21
MSH6P52701 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
MSH6P52701 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7.47□□□□□ -1.21
MSH6P52701 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC7.47□□□□□ -1.21
MSH6P52701 AC020910.2-201ENST00000603635 610 ntBASIC7.47□□□□□ -1.21
MSH6P52701 AC068831.8-201ENST00000620171 435 ntBASIC7.47□□□□□ -1.21
MSH6P52701 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
MSH6P52701 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
MSH6P52701 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
MSH6P52701 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC7.47□□□□□ -1.21
MSH6P52701 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
MSH6P52701 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
MSH6P52701 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms