Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC023141.6-201ENST00000429418 337 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC002069.1-201ENST00000429649 1159 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 AL596266.1-201ENST00000448132 400 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 RAB28P3-201ENST00000448325 597 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC5.89□□□□□ -1.47
PTPN9P43378 LRRC37A14P-201ENST00000452297 462 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN9P43378 MTND2P30-201ENST00000456663 382 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN9P43378 UBFD1P1-201ENST00000473259 814 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC117394.1-201ENST00000477323 567 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC087672.1-201ENST00000479876 766 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.89□□□□□ -1.47
PTPN9P43378 PCNAP1-201ENST00000505363 709 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC138409.2-202ENST00000507274 458 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 NPM1P21-201ENST00000513394 762 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 RN7SKP253-201ENST00000516424 309 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 OR8Q1P-201ENST00000526467 655 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 PMS2P3-207ENST00000529061 717 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
PTPN9P43378 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 IGBP1P1-201ENST00000554337 1009 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN9P43378 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.89□□□□□ -1.47
PTPN9P43378 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.89□□□□□ -1.47
PTPN9P43378 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
PTPN9P43378 AC016745.2-201ENST00000608834 3443 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
PTPN9P43378 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 AC025470.1-201ENST00000510053 2032 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 AC083899.1-201ENST00000454465 3819 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 OR4F13P-202ENST00000560066 2054 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 MRE11P1-201ENST00000464884 2127 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.89□□□□□ -1.47
PTPN9P43378 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
PTPN9P43378 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
PTPN9P43378 AC091305.2-201ENST00000624049 1576 ntBASIC5.89□□□□□ -1.47
PTPN9P43378 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
PTPN9P43378 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 RN7SKP292-201ENST00000365522 317 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 PEX12P1-201ENST00000400284 1048 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 MTCO1P45-201ENST00000431457 267 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 AC006335.2-201ENST00000437993 330 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 SCAND3P1-201ENST00000439854 1060 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 PCNPP2-201ENST00000441651 455 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 RPS10P18-201ENST00000442662 495 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN9P43378 NXT1P1-201ENST00000458481 316 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
PTPN9P43378 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN9P43378 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN9P43378 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.88□□□□□ -1.47
PTPN9P43378 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN9P43378 AP004609.2-201ENST00000532177 190 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN9P43378 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 AC027176.2-201ENST00000559166 746 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN9P43378 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN9P43378 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.88□□□□□ -1.47
PTPN9P43378 AL391001.1-201ENST00000602747 715 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 AL390318.1-201ENST00000624564 687 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 AC005618.4-201ENST00000625053 554 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.88□□□□□ -1.47
PTPN9P43378 MIR193BHG-214ENST00000641765 509 ntBASIC5.88□□□□□ -1.47
PTPN9P43378 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
PTPN9P43378 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.88□□□□□ -1.47
PTPN9P43378 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
PTPN9P43378 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN9P43378 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN9P43378 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
PTPN9P43378 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
PTPN9P43378 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PTPN9P43378 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN9P43378 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
PTPN9P43378 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.87□□□□□ -1.47
PTPN9P43378 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN9P43378 AC005297.1-201ENST00000444765 862 ntBASIC5.87□□□□□ -1.47
PTPN9P43378 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.87□□□□□ -1.47
PTPN9P43378 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.87□□□□□ -1.47
PTPN9P43378 AP000547.1-201ENST00000454360 617 ntBASIC5.87□□□□□ -1.47
PTPN9P43378 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms