Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC1A1P43005 AL358178.1-201ENST00000407698 397 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AC099535.1-201ENST00000408928 371 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 PCNPP4-201ENST00000414817 517 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 Z93019.1-201ENST00000416450 973 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC1A1P43005 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC1A1P43005 PRPF38AP1-201ENST00000451976 933 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AC079168.1-201ENST00000458741 345 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC1A1P43005 AC078878.1-201ENST00000539832 958 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AL359219.2-201ENST00000555184 348 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC1A1P43005 AC010547.6-201ENST00000571789 193 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AC060766.1-201ENST00000590824 627 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC1A1P43005 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.63□□□□□ -1.51
SLC1A1P43005 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC1A1P43005 FRG1EP-201ENST00000634469 770 ntBASIC5.63□□□□□ -1.51
SLC1A1P43005 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.63□□□□□ -1.51
SLC1A1P43005 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.63□□□□□ -1.51
SLC1A1P43005 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
SLC1A1P43005 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
SLC1A1P43005 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 OR9K1P-201ENST00000326513 941 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 RNA5SP122-201ENST00000384457 108 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 EI24P3-201ENST00000399046 1062 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 LYPLA1P3-201ENST00000402650 695 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
SLC1A1P43005 SRSF1P1-201ENST00000424058 520 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
SLC1A1P43005 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 GSTM5P1-201ENST00000434751 660 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 AC002504.1-201ENST00000438281 691 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 GAPDHP25-201ENST00000447061 1001 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 AC105399.1-202ENST00000447303 205 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 RPL12P24-201ENST00000474907 486 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 IGKV2-4-201ENST00000523070 340 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 AC106730.2-201ENST00000566641 540 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 AL499605.1-201ENST00000604628 403 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 AC100767.2-201ENST00000604840 693 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SLC1A1P43005 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.62□□□□□ -1.51
SLC1A1P43005 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 AC003985.2-201ENST00000562268 1669 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.62□□□□□ -1.51
SLC1A1P43005 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SLC1A1P43005 AC011755.1-201ENST00000623763 2049 ntBASIC5.62□□□□□ -1.51
SLC1A1P43005 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
SLC1A1P43005 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SLC1A1P43005 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.61□□□□□ -1.51
SLC1A1P43005 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SLC1A1P43005 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms