Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
RFC3P40938 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.12□□□□□ -1.59
RFC3P40938 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.12□□□□□ -1.59
RFC3P40938 AC114774.1-201ENST00000507410 1770 ntBASIC5.11□□□□□ -1.59
RFC3P40938 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 C4BPAP1-201ENST00000415474 1893 ntBASIC5.11□□□□□ -1.59
RFC3P40938 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RFC3P40938 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 AC068870.1-201ENST00000563737 2455 ntBASIC5.11□□□□□ -1.59
RFC3P40938 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 GAPDHP24-201ENST00000328713 983 ntBASIC5.11□□□□□ -1.59
RFC3P40938 RNU6-673P-201ENST00000365084 104 ntBASIC5.11□□□□□ -1.59
RFC3P40938 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 RNA5SP91-201ENST00000390902 119 ntBASIC5.11□□□□□ -1.59
RFC3P40938 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC3P40938 CYCSP6-201ENST00000434498 302 ntBASIC5.11□□□□□ -1.59
RFC3P40938 AC099670.2-201ENST00000435130 321 ntBASIC5.11□□□□□ -1.59
RFC3P40938 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC3P40938 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
RFC3P40938 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC3P40938 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 AC090638.1-201ENST00000498296 909 ntBASIC5.11□□□□□ -1.59
RFC3P40938 AC008638.1-201ENST00000506035 866 ntBASIC5.11□□□□□ -1.59
RFC3P40938 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.11□□□□□ -1.59
RFC3P40938 OR8Q1P-201ENST00000526467 655 ntBASIC5.11□□□□□ -1.59
RFC3P40938 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC3P40938 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.11□□□□□ -1.59
RFC3P40938 AGGF1P7-201ENST00000562369 913 ntBASIC5.11□□□□□ -1.59
RFC3P40938 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC3P40938 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.11□□□□□ -1.59
RFC3P40938 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.11□□□□□ -1.59
RFC3P40938 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.11□□□□□ -1.59
RFC3P40938 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.11□□□□□ -1.59
RFC3P40938 AL513327.3-201ENST00000602618 469 ntBASIC5.11□□□□□ -1.59
RFC3P40938 SUMO2P15-201ENST00000604285 278 ntBASIC5.11□□□□□ -1.59
RFC3P40938 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.11□□□□□ -1.59
RFC3P40938 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.11□□□□□ -1.59
RFC3P40938 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.11□□□□□ -1.59
RFC3P40938 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
RFC3P40938 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RFC3P40938 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.1□□□□□ -1.59
RFC3P40938 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 SNORD1C-201ENST00000363315 78 ntBASIC5.1□□□□□ -1.59
RFC3P40938 U3.7-201ENST00000363668 216 ntBASIC5.1□□□□□ -1.59
RFC3P40938 U3.10-201ENST00000364459 214 ntBASIC5.1□□□□□ -1.59
RFC3P40938 RNU4-2-201ENST00000365668 141 ntBASIC5.1□□□□□ -1.59
RFC3P40938 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 GAPDHP42-201ENST00000406848 981 ntBASIC5.1□□□□□ -1.59
RFC3P40938 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 AC079809.1-201ENST00000415468 276 ntBASIC5.1□□□□□ -1.59
RFC3P40938 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.1□□□□□ -1.59
RFC3P40938 USP24P1-201ENST00000433802 779 ntBASIC5.1□□□□□ -1.59
RFC3P40938 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.1□□□□□ -1.59
RFC3P40938 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.1□□□□□ -1.59
RFC3P40938 AC235565.1-201ENST00000456962 1325 ntBASIC5.1□□□□□ -1.59
RFC3P40938 RNU7-157P-201ENST00000459600 66 ntBASIC5.1□□□□□ -1.59
RFC3P40938 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.1□□□□□ -1.59
RFC3P40938 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.1□□□□□ -1.59
RFC3P40938 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.1□□□□□ -1.59
RFC3P40938 RNA5SP34-201ENST00000516887 130 ntBASIC5.1□□□□□ -1.59
RFC3P40938 NRBF2P4-201ENST00000520874 850 ntBASIC5.1□□□□□ -1.59
RFC3P40938 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.1□□□□□ -1.59
RFC3P40938 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.1□□□□□ -1.59
RFC3P40938 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.1□□□□□ -1.59
RFC3P40938 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RFC3P40938 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.1□□□□□ -1.59
RFC3P40938 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.1□□□□□ -1.59
RFC3P40938 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.1□□□□□ -1.59
RFC3P40938 OR7E18P-201ENST00000592589 702 ntBASIC5.1□□□□□ -1.59
RFC3P40938 IMMP1LP3-201ENST00000604197 224 ntBASIC5.1□□□□□ -1.59
RFC3P40938 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.1□□□□□ -1.59
RFC3P40938 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.1□□□□□ -1.59
RFC3P40938 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.1□□□□□ -1.59
RFC3P40938 AL118522.2-201ENST00000616045 615 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 140.9 ms