Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL138820.1-201ENST00000617901 5305 ntBASIC6.81□□□□□ -1.32
RFC4P35249 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
RFC4P35249 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
RFC4P35249 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.81□□□□□ -1.32
RFC4P35249 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.81□□□□□ -1.32
RFC4P35249 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
RFC4P35249 MIR600-201ENST00000385007 98 ntBASIC6.81□□□□□ -1.32
RFC4P35249 HSPA8P15-201ENST00000401676 786 ntBASIC6.81□□□□□ -1.32
RFC4P35249 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC6.81□□□□□ -1.32
RFC4P35249 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.81□□□□□ -1.32
RFC4P35249 RSU1P1-201ENST00000453416 441 ntBASIC6.81□□□□□ -1.32
RFC4P35249 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.81□□□□□ -1.32
RFC4P35249 RN7SL346P-201ENST00000491561 294 ntBASIC6.81□□□□□ -1.32
RFC4P35249 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.81□□□□□ -1.32
RFC4P35249 GTF2F2P1-201ENST00000511083 675 ntBASIC6.81□□□□□ -1.32
RFC4P35249 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.81□□□□□ -1.32
RFC4P35249 snoU109.5-201ENST00000516231 132 ntBASIC6.81□□□□□ -1.32
RFC4P35249 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC6.81□□□□□ -1.32
RFC4P35249 YWHABP2-201ENST00000540201 713 ntBASIC6.81□□□□□ -1.32
RFC4P35249 AP002373.2-201ENST00000541631 1060 ntBASIC6.81□□□□□ -1.32
RFC4P35249 EDDM3DP-201ENST00000554692 434 ntBASIC6.81□□□□□ -1.32
RFC4P35249 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.81□□□□□ -1.32
RFC4P35249 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.81□□□□□ -1.32
RFC4P35249 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.81□□□□□ -1.32
RFC4P35249 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.81□□□□□ -1.32
RFC4P35249 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RFC4P35249 AC099654.11-201ENST00000638857 294 ntBASIC6.81□□□□□ -1.32
RFC4P35249 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
RFC4P35249 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.81□□□□□ -1.32
RFC4P35249 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 AL078621.3-201ENST00000623707 2042 ntBASIC6.81□□□□□ -1.32
RFC4P35249 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
RFC4P35249 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
RFC4P35249 AL353796.1-201ENST00000561542 3241 ntBASIC6.8□□□□□ -1.32
RFC4P35249 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
RFC4P35249 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.8□□□□□ -1.32
RFC4P35249 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RFC4P35249 AP004289.1-201ENST00000436307 2205 ntBASIC6.8□□□□□ -1.32
RFC4P35249 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 MIR192-201ENST00000384915 110 ntBASIC6.8□□□□□ -1.32
RFC4P35249 GJA6P-201ENST00000415117 1042 ntBASIC6.8□□□□□ -1.32
RFC4P35249 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6.8□□□□□ -1.32
RFC4P35249 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.8□□□□□ -1.32
RFC4P35249 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.8□□□□□ -1.32
RFC4P35249 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC6.8□□□□□ -1.32
RFC4P35249 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.8□□□□□ -1.32
RFC4P35249 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.8□□□□□ -1.32
RFC4P35249 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.8□□□□□ -1.32
RFC4P35249 RPL7P16-201ENST00000479738 738 ntBASIC6.8□□□□□ -1.32
RFC4P35249 RPL37AP8-201ENST00000494116 276 ntBASIC6.8□□□□□ -1.32
RFC4P35249 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.8□□□□□ -1.32
RFC4P35249 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.8□□□□□ -1.32
RFC4P35249 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.8□□□□□ -1.32
RFC4P35249 AP003789.1-201ENST00000617737 605 ntBASIC6.8□□□□□ -1.32
RFC4P35249 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.8□□□□□ -1.32
RFC4P35249 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.8□□□□□ -1.32
RFC4P35249 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
RFC4P35249 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RFC4P35249 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RFC4P35249 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 MTND5P12-201ENST00000502851 1449 ntBASIC6.79□□□□□ -1.32
RFC4P35249 AC005261.2-201ENST00000593427 4258 ntBASIC6.79□□□□□ -1.32
RFC4P35249 AL121886.1-201ENST00000358609 435 ntBASIC6.79□□□□□ -1.32
RFC4P35249 SNORA70H-201ENST00000383910 135 ntBASIC6.79□□□□□ -1.32
RFC4P35249 SNORA70J-201ENST00000384182 135 ntBASIC6.79□□□□□ -1.32
RFC4P35249 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
RFC4P35249 RPL11P3-201ENST00000395256 523 ntBASIC6.79□□□□□ -1.32
RFC4P35249 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
RFC4P35249 COX6B1P1-201ENST00000415962 213 ntBASIC6.79□□□□□ -1.32
RFC4P35249 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC6.79□□□□□ -1.32
RFC4P35249 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.79□□□□□ -1.32
RFC4P35249 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.79□□□□□ -1.32
RFC4P35249 IGLV2-34-201ENST00000490007 283 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms