Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CHRNA3P32297 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA3P32297 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.81□□□□□ -1.48
CHRNA3P32297 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA3P32297 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA3P32297 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.81□□□□□ -1.48
CHRNA3P32297 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC005297.1-201ENST00000444765 862 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AL136038.1-201ENST00000497246 351 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC074087.1-201ENST00000512059 724 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 RNA5SP230-201ENST00000517039 122 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.81□□□□□ -1.48
CHRNA3P32297 MRPS16P1-201ENST00000523462 412 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC025423.2-201ENST00000537570 439 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC016839.1-201ENST00000578162 867 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC010503.3-201ENST00000594355 540 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC063977.5-201ENST00000601044 974 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 FO393422.1-201ENST00000603908 708 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AC092944.2-201ENST00000605443 889 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 FAM72A-208ENST00000607379 1139 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 MIR6768-201ENST00000610734 72 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 uc_338.7-201ENST00000621834 124 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AL390318.1-201ENST00000624564 687 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 AL022311.1-201ENST00000623726 19416 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CHRNA3P32297 Z83820.1-201ENST00000456978 1499 ntBASIC5.81□□□□□ -1.48
CHRNA3P32297 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
CHRNA3P32297 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CHRNA3P32297 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.81□□□□□ -1.48
CHRNA3P32297 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.81□□□□□ -1.48
CHRNA3P32297 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA3P32297 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CHRNA3P32297 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA3P32297 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
CHRNA3P32297 GAPDHP24-201ENST00000328713 983 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA3P32297 SNORA51.1-201ENST00000363243 140 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 U3.7-201ENST00000363668 216 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 U3.23-201ENST00000391132 200 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 RMRPP5-201ENST00000411156 267 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA3P32297 AC079355.1-201ENST00000421770 223 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AL034379.1-201ENST00000423216 253 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 PRUNEP1-201ENST00000425846 705 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA3P32297 BTG3P1-201ENST00000435859 716 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA3P32297 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.8□□□□□ -1.48
CHRNA3P32297 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 NPM1P28-201ENST00000492269 840 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA3P32297 DUTP7-201ENST00000507982 486 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.8□□□□□ -1.48
CHRNA3P32297 AP000619.2-201ENST00000546014 969 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA3P32297 AL049872.1-201ENST00000556323 322 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 MIR4660-201ENST00000583549 74 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.8□□□□□ -1.48
CHRNA3P32297 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.8□□□□□ -1.48
CHRNA3P32297 AL691477.1-201ENST00000624398 162 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 AL049767.1-202ENST00000637826 242 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
CHRNA3P32297 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
CHRNA3P32297 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA3P32297 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CHRNA3P32297 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.8□□□□□ -1.48
CHRNA3P32297 MRE11P1-201ENST00000464884 2127 ntBASIC5.8□□□□□ -1.48
CHRNA3P32297 MTCO1P11-201ENST00000429111 1528 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHRNA3P32297 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
CHRNA3P32297 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
CHRNA3P32297 SRRM1P3-201ENST00000426911 2678 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA3P32297 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
CHRNA3P32297 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.79□□□□□ -1.48
CHRNA3P32297 RNA5SP30-201ENST00000365552 115 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 RNA5SP241-201ENST00000391326 114 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 RPS6P23-201ENST00000413224 722 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 NENFP1-201ENST00000419476 466 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 AL121776.1-201ENST00000429337 372 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.79□□□□□ -1.48
CHRNA3P32297 AC073909.1-201ENST00000447112 999 ntBASIC5.79□□□□□ -1.48
CHRNA3P32297 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.79□□□□□ -1.48
CHRNA3P32297 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.79□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms