Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
CD40LGP29965 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CD40LGP29965 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
CD40LGP29965 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 RLIMP2-201ENST00000427891 1563 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 AC013442.1-201ENST00000397347 228 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 RBBP4P5-201ENST00000398583 1266 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 RN7SKP86-201ENST00000410454 332 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 RPL35AP31-201ENST00000418340 337 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 OR51A6P-201ENST00000418680 1004 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40LGP29965 AC092447.2-201ENST00000435487 669 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.88□□□□□ -1.63
CD40LGP29965 RPL6P30-201ENST00000443382 862 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 CFL1P4-201ENST00000451536 498 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 AC118758.1-202ENST00000454719 225 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AC009963.3-201ENST00000458090 486 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 RPL12P30-201ENST00000488389 499 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 RPL9P15-201ENST00000491096 532 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AGGF1P3-201ENST00000493675 1213 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 RPS24P16-201ENST00000497294 392 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AC008629.2-201ENST00000503783 483 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AC011411.1-201ENST00000509592 876 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40LGP29965 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40LGP29965 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40LGP29965 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40LGP29965 DUX4L52-201ENST00000549363 777 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AGGF1P7-201ENST00000562369 913 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC4.88□□□□□ -1.63
CD40LGP29965 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC4.88□□□□□ -1.63
CD40LGP29965 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 SMIM12P1-201ENST00000603004 274 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AL137072.1-201ENST00000603444 466 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 AC025574.2-201ENST00000615621 514 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 FAM27E2-201ENST00000619668 403 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 AL357562.1-201ENST00000624911 609 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 AC003973.3-201ENST00000624863 2822 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 NEAT1-202ENST00000501122 22743 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
CD40LGP29965 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CD40LGP29965 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.88□□□□□ -1.63
CD40LGP29965 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CD40LGP29965 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40LGP29965 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.87□□□□□ -1.63
CD40LGP29965 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40LGP29965 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
CD40LGP29965 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CD40LGP29965 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CD40LGP29965 AL672167.2-201ENST00000377164 879 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40LGP29965 SNRPEP6-201ENST00000407465 277 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 RN7SKP125-201ENST00000410481 302 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 Z68694.1-201ENST00000413929 841 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40LGP29965 RPL36AP10-201ENST00000421785 322 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40LGP29965 AC130360.1-201ENST00000425489 1117 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40LGP29965 AC094019.1-201ENST00000434678 472 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 EEF1B2P3-201ENST00000447718 678 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 BTF3P6-201ENST00000448054 499 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40LGP29965 RPL34P33-201ENST00000486062 334 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 ARL4AP1-201ENST00000503220 705 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40LGP29965 RNA5SP441-201ENST00000516809 88 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.87□□□□□ -1.63
CD40LGP29965 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.87□□□□□ -1.63
CD40LGP29965 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.87□□□□□ -1.63
CD40LGP29965 AC084121.1-201ENST00000533882 835 ntBASIC4.87□□□□□ -1.63
CD40LGP29965 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC4.87□□□□□ -1.63
CD40LGP29965 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms