Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 RNU6-304P-201ENST00000364855 107 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.37□□□□□ -1.39
COL6A2P12110 RNU6-549P-201ENST00000384433 107 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 RPL23AP59-201ENST00000399415 461 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 Y_RNA.599-201ENST00000410489 109 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC010385.1-201ENST00000412374 256 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AL139135.1-201ENST00000412675 209 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 UBE2V1P14-201ENST00000415815 558 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 RPA2P2-201ENST00000419698 796 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.37□□□□□ -1.39
COL6A2P12110 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.37□□□□□ -1.39
COL6A2P12110 ATP6V1G1P4-201ENST00000438388 335 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 MTND5P2-201ENST00000442927 1142 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC103563.5-201ENST00000455643 364 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.37□□□□□ -1.39
COL6A2P12110 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 RPL7AP30-201ENST00000482859 796 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC105391.1-201ENST00000503155 1045 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 NDUFB4P12-201ENST00000513465 390 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 LRTOMT-217ENST00000539587 428 ntTSL 2 BASIC6.37□□□□□ -1.39
COL6A2P12110 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.37□□□□□ -1.39
COL6A2P12110 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC6.37□□□□□ -1.39
COL6A2P12110 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC090616.1-201ENST00000583895 447 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC6.37□□□□□ -1.39
COL6A2P12110 AL645933.2-201ENST00000606743 1207 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 TP53TG1_2.1-201ENST00000611226 182 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 MIR6774-201ENST00000614651 70 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AL162574.1-201ENST00000615702 950 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC009283.1-201ENST00000615852 645 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 FRG1HP-204ENST00000617940 757 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC073569.3-201ENST00000619055 682 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC109454.4-201ENST00000623411 649 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AC073530.2-201ENST00000623987 261 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AL049536.1-201ENST00000625043 744 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 TEX41-279ENST00000629149 609 ntTSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 AC116158.1-201ENST00000560231 2129 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL6A2P12110 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC6.36□□□□□ -1.39
COL6A2P12110 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.36□□□□□ -1.39
COL6A2P12110 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 BIN2P1-201ENST00000504996 1530 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.36□□□□□ -1.39
COL6A2P12110 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL6A2P12110 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL6A2P12110 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 SNORD116.1-201ENST00000365628 92 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 SMARCE1P6-201ENST00000398372 1216 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.36□□□□□ -1.39
COL6A2P12110 UBE2F-204ENST00000409953 924 ntTSL 3 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.36□□□□□ -1.39
COL6A2P12110 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC6.36□□□□□ -1.39
COL6A2P12110 Z84478.1-201ENST00000438230 1219 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 FGF7P5-201ENST00000441829 291 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 RPS7P4-201ENST00000444127 582 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.36□□□□□ -1.39
COL6A2P12110 RPS27AP8-201ENST00000452665 445 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 NECAP1P2-201ENST00000455668 727 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL6A2P12110 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
COL6A2P12110 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.36□□□□□ -1.39
COL6A2P12110 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.36□□□□□ -1.39
COL6A2P12110 SUMO2P4-201ENST00000504193 276 ntBASIC6.36□□□□□ -1.39
COL6A2P12110 PSMA2P2-201ENST00000504319 686 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms