Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.31□□□□□ -1.72
CD28P10747 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.31□□□□□ -1.72
CD28P10747 RNA5SP335-201ENST00000363817 110 ntBASIC4.31□□□□□ -1.72
CD28P10747 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CD28P10747 DNAJA1P3-201ENST00000399417 1194 ntBASIC4.31□□□□□ -1.72
CD28P10747 RANP7-201ENST00000418085 644 ntBASIC4.31□□□□□ -1.72
CD28P10747 AC092106.1-201ENST00000444291 373 ntBASIC4.31□□□□□ -1.72
CD28P10747 FAR2P1-206ENST00000449736 709 ntBASIC4.31□□□□□ -1.72
CD28P10747 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.31□□□□□ -1.72
CD28P10747 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 RPS18P6-201ENST00000476880 458 ntBASIC4.31□□□□□ -1.72
CD28P10747 RPS21P4-201ENST00000487122 248 ntBASIC4.31□□□□□ -1.72
CD28P10747 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC4.31□□□□□ -1.72
CD28P10747 RPEP1-201ENST00000504507 658 ntBASIC4.31□□□□□ -1.72
CD28P10747 AC093815.1-201ENST00000508637 280 ntBASIC4.31□□□□□ -1.72
CD28P10747 AC147055.3-201ENST00000510547 851 ntBASIC4.31□□□□□ -1.72
CD28P10747 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.31□□□□□ -1.72
CD28P10747 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.31□□□□□ -1.72
CD28P10747 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.31□□□□□ -1.72
CD28P10747 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.31□□□□□ -1.72
CD28P10747 AC139697.1-201ENST00000548429 745 ntBASIC4.31□□□□□ -1.72
CD28P10747 BLZF2P-201ENST00000553776 1130 ntBASIC4.31□□□□□ -1.72
CD28P10747 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.31□□□□□ -1.72
CD28P10747 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 MIR4433B-201ENST00000581329 102 ntBASIC4.31□□□□□ -1.72
CD28P10747 BNIP3P32-201ENST00000600015 554 ntBASIC4.31□□□□□ -1.72
CD28P10747 MIR7155-201ENST00000615925 56 ntBASIC4.31□□□□□ -1.72
CD28P10747 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.31□□□□□ -1.72
CD28P10747 AC118658.2-201ENST00000618697 459 ntBASIC4.31□□□□□ -1.72
CD28P10747 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.31□□□□□ -1.72
CD28P10747 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 MUC2-202ENST00000613187 4845 ntBASIC4.31□□□□□ -1.72
CD28P10747 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.31□□□□□ -1.72
CD28P10747 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 MT-RNR2-201ENST00000387347 1559 ntBASIC4.31□□□□□ -1.72
CD28P10747 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CD28P10747 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.31□□□□□ -1.72
CD28P10747 AC144833.1-201ENST00000567953 4089 ntBASIC4.31□□□□□ -1.72
CD28P10747 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CD28P10747 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC011933.2-201ENST00000578539 2790 ntBASIC4.3□□□□□ -1.72
CD28P10747 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CD28P10747 RPL23P2-201ENST00000320371 421 ntBASIC4.3□□□□□ -1.72
CD28P10747 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 AC005294.1-201ENST00000355509 281 ntBASIC4.3□□□□□ -1.72
CD28P10747 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 RNA5SP507-201ENST00000363603 121 ntBASIC4.3□□□□□ -1.72
CD28P10747 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CD28P10747 MIR937-201ENST00000401271 86 ntBASIC4.3□□□□□ -1.72
CD28P10747 RN7SKP273-201ENST00000411392 314 ntBASIC4.3□□□□□ -1.72
CD28P10747 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD28P10747 AC006455.6-201ENST00000426192 893 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 FAM96AP1-201ENST00000430879 482 ntBASIC4.3□□□□□ -1.72
CD28P10747 RPS27P18-201ENST00000431701 247 ntBASIC4.3□□□□□ -1.72
CD28P10747 USP24P1-201ENST00000433802 779 ntBASIC4.3□□□□□ -1.72
CD28P10747 OR52B5P-201ENST00000435337 951 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 KRT8P51-201ENST00000438938 274 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC245047.2-201ENST00000441060 530 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC105399.1-202ENST00000447303 205 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.3□□□□□ -1.72
CD28P10747 RN7SL222P-201ENST00000476452 299 ntBASIC4.3□□□□□ -1.72
CD28P10747 RN7SL447P-201ENST00000494711 245 ntBASIC4.3□□□□□ -1.72
CD28P10747 RN7SL808P-201ENST00000496066 299 ntBASIC4.3□□□□□ -1.72
CD28P10747 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 ST13P12-201ENST00000508958 1094 ntBASIC4.3□□□□□ -1.72
CD28P10747 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.3□□□□□ -1.72
CD28P10747 AC097486.1-201ENST00000515331 210 ntBASIC4.3□□□□□ -1.72
CD28P10747 snoU109.5-201ENST00000516231 132 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms