Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 MIR4701-201ENST00000583094 63 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 RN7SL475P-201ENST00000583379 298 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC100767.2-201ENST00000604840 693 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 U6atac.1-201ENST00000616025 117 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC092656.1-203ENST00000624134 423 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 ADGRE4P-202ENST00000600751 2810 ntTSL 5 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AP002364.1-201ENST00000623330 3386 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 AC012020.1-201ENST00000624541 1728 ntBASIC8.63□□□□□ -1.03
CSB-PGBD3P0DP91 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AL354854.1-201ENST00000455940 1363 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 RNU4-4P-201ENST00000364588 130 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC006065.1-201ENST00000422539 802 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC112492.2-201ENST00000432774 1030 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AL138787.1-202ENST00000437804 898 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 ATP5LP2-201ENST00000440646 311 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 SEPHS1P4-201ENST00000446112 1176 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC104978.1-201ENST00000449387 391 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 RPL7P32-201ENST00000457119 744 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 RNU7-125P-201ENST00000458760 62 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC013701.1-201ENST00000522657 465 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 TPRX1P1-201ENST00000557620 319 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC025449.1-201ENST00000603896 529 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AL354718.1-201ENST00000619764 589 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 MIR6886-201ENST00000619864 61 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 MTCO1P11-201ENST00000429111 1528 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 MTCO1P28-201ENST00000574177 1528 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 LRRC37A4P-201ENST00000579913 3243 ntTSL 2 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AC138915.4-201ENST00000565549 4147 ntBASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC8.62□□□□□ -1.03
CSB-PGBD3P0DP91 EPS15P1-202ENST00000459691 2071 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC091305.2-201ENST00000624049 1576 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 SP110-201ENST00000258381 2426 ntAPPRIS P4 TSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC021876.1-201ENST00000425959 359 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AL121601.2-201ENST00000438019 707 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC023512.1-201ENST00000444513 499 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 PTENP1-201ENST00000447117 1215 ntBASIC8.61□□□□□ -1.03
CSB-PGBD3P0DP91 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms