Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
TPM1P09493 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 RNA5SP296-201ENST00000410523 111 ntBASIC5.95□□□□□ -1.46
TPM1P09493 RN7SKP286-201ENST00000410894 299 ntBASIC5.95□□□□□ -1.46
TPM1P09493 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.95□□□□□ -1.46
TPM1P09493 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.95□□□□□ -1.46
TPM1P09493 RPL34P6-201ENST00000432390 345 ntBASIC5.95□□□□□ -1.46
TPM1P09493 HMGB3P24-201ENST00000433260 622 ntBASIC5.95□□□□□ -1.46
TPM1P09493 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 AL450023.1-201ENST00000450868 751 ntBASIC5.95□□□□□ -1.46
TPM1P09493 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 RNA5SP103-201ENST00000459503 118 ntBASIC5.95□□□□□ -1.46
TPM1P09493 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 IMPA1P1-201ENST00000510718 842 ntBASIC5.95□□□□□ -1.46
TPM1P09493 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 AC022360.1-201ENST00000521058 340 ntBASIC5.95□□□□□ -1.46
TPM1P09493 AC027369.5-201ENST00000533838 755 ntBASIC5.95□□□□□ -1.46
TPM1P09493 AC084121.1-201ENST00000533882 835 ntBASIC5.95□□□□□ -1.46
TPM1P09493 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.95□□□□□ -1.46
TPM1P09493 AC002310.3-201ENST00000569728 723 ntBASIC5.95□□□□□ -1.46
TPM1P09493 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.95□□□□□ -1.46
TPM1P09493 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.95□□□□□ -1.46
TPM1P09493 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.95□□□□□ -1.46
TPM1P09493 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 AL365181.4-201ENST00000609800 547 ntBASIC5.95□□□□□ -1.46
TPM1P09493 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 AC109583.2-201ENST00000617367 129 ntBASIC5.95□□□□□ -1.46
TPM1P09493 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 CDC27P2-201ENST00000425026 1922 ntBASIC5.95□□□□□ -1.46
TPM1P09493 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.95□□□□□ -1.46
TPM1P09493 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TPM1P09493 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TPM1P09493 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.94□□□□□ -1.46
TPM1P09493 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM1P09493 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
TPM1P09493 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM1P09493 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TPM1P09493 MTHFD2P5-201ENST00000320415 844 ntBASIC5.94□□□□□ -1.46
TPM1P09493 RN7SKP97-201ENST00000410966 333 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 AL157385.1-201ENST00000446973 268 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 RN7SL273P-201ENST00000481561 299 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC021006.1-201ENST00000489849 553 ntBASIC5.94□□□□□ -1.46
TPM1P09493 RN7SL591P-201ENST00000496150 292 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
TPM1P09493 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.94□□□□□ -1.46
TPM1P09493 AC018797.1-201ENST00000510791 255 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC109464.1-201ENST00000511091 819 ntBASIC5.94□□□□□ -1.46
TPM1P09493 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM1P09493 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.94□□□□□ -1.46
TPM1P09493 HMGB1P42-201ENST00000532126 553 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 MIR3154-201ENST00000577829 84 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.94□□□□□ -1.46
TPM1P09493 AC244107.2-201ENST00000611773 76 ntBASIC5.94□□□□□ -1.46
TPM1P09493 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.94□□□□□ -1.46
TPM1P09493 AC111152.1-202ENST00000635848 339 ntBASIC5.94□□□□□ -1.46
TPM1P09493 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
TPM1P09493 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.94□□□□□ -1.46
TPM1P09493 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.94□□□□□ -1.46
TPM1P09493 AL450345.1-202ENST00000605741 3881 ntBASIC5.94□□□□□ -1.46
TPM1P09493 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TPM1P09493 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
TPM1P09493 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
TPM1P09493 RN7SKP153-201ENST00000365026 316 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AL035660.1-201ENST00000422041 222 ntBASIC5.93□□□□□ -1.46
TPM1P09493 PRUNEP1-201ENST00000425846 705 ntBASIC5.93□□□□□ -1.46
TPM1P09493 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.93□□□□□ -1.46
TPM1P09493 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 NDUFS5P5-201ENST00000437256 321 ntBASIC5.93□□□□□ -1.46
TPM1P09493 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.93□□□□□ -1.46
TPM1P09493 ACA64.1-201ENST00000459171 127 ntBASIC5.93□□□□□ -1.46
TPM1P09493 RNU7-157P-201ENST00000459600 66 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms