Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AP002884.1-201ENST00000479691 655 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC093827.1-201ENST00000480094 861 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL1P09341 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC139365.2-201ENST00000517972 253 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
CXCL1P09341 AP003396.4-201ENST00000527574 265 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC022882.1-201ENST00000532142 501 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 RPA2P1-201ENST00000556557 721 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC4.12□□□□□ -1.75
CXCL1P09341 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 AC002519.2-203ENST00000567043 837 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 MT1CP-201ENST00000567054 174 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 AL135999.3-201ENST00000610501 812 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 MIR6809-201ENST00000612189 116 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 AC245014.3-201ENST00000618589 347 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 MIR6829-201ENST00000620375 67 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AL136228.1-201ENST00000622221 319 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC079298.2-201ENST00000623885 459 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC099654.6-201ENST00000636487 512 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CXCL1P09341 PDZK1P1-202ENST00000425209 1350 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.12□□□□□ -1.75
CXCL1P09341 PWAR1-201ENST00000624188 2414 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 AL133268.1-201ENST00000405676 1401 ntBASIC4.12□□□□□ -1.75
CXCL1P09341 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CXCL1P09341 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CXCL1P09341 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL1P09341 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 AC104118.1-201ENST00000607625 1589 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL1P09341 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 OR9G4-201ENST00000302957 984 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RNA5SP30-201ENST00000365552 115 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AL096711.1-201ENST00000404780 554 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RN7SKP29-201ENST00000410957 272 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RN7SKP247-201ENST00000411094 308 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL1P09341 AL035422.1-201ENST00000414193 397 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 FAM183DP-201ENST00000421987 399 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC092646.1-201ENST00000427142 901 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AL353662.1-201ENST00000439099 327 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC007383.1-201ENST00000445875 636 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 AL645937.3-201ENST00000453647 936 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 CYCSP34-201ENST00000458172 304 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RPL5P16-201ENST00000471467 790 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RPL9P15-201ENST00000491096 532 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RN7SL362P-201ENST00000494228 267 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC113367.2-201ENST00000505749 160 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.11□□□□□ -1.75
CXCL1P09341 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL1P09341 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL1P09341 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL1P09341 HNRNPRP2-201ENST00000528421 743 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL1P09341 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL1P09341 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL1P09341 AL078601.3-201ENST00000573303 535 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 MIR4776-2-201ENST00000580204 80 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC012368.3-201ENST00000604190 219 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC4.11□□□□□ -1.75
CXCL1P09341 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC244107.2-201ENST00000611773 76 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 AC129915.3-201ENST00000634128 948 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 AC073869.8-201ENST00000641806 335 ntBASIC4.11□□□□□ -1.75
CXCL1P09341 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.11□□□□□ -1.75
CXCL1P09341 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CXCL1P09341 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.11□□□□□ -1.75
CXCL1P09341 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms