Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 RNU1-136P-201ENST00000384181 164 ntBASIC6.12□□□□□ -1.43
MMP3P08254 MIR585-201ENST00000384887 94 ntBASIC6.12□□□□□ -1.43
MMP3P08254 RNU1-149P-201ENST00000390870 161 ntBASIC6.12□□□□□ -1.43
MMP3P08254 RPL11P3-201ENST00000395256 523 ntBASIC6.12□□□□□ -1.43
MMP3P08254 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 RN7SKP125-201ENST00000410481 302 ntBASIC6.12□□□□□ -1.43
MMP3P08254 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP3P08254 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 GSTM5P1-201ENST00000434751 660 ntBASIC6.12□□□□□ -1.43
MMP3P08254 ZNF101P1-201ENST00000435701 1720 ntBASIC6.12□□□□□ -1.43
MMP3P08254 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP3P08254 ZNF733P-202ENST00000444809 1573 ntBASIC6.12□□□□□ -1.43
MMP3P08254 AL451063.1-201ENST00000450164 1133 ntBASIC6.12□□□□□ -1.43
MMP3P08254 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP3P08254 AC002075.1-201ENST00000457396 676 ntBASIC6.12□□□□□ -1.43
MMP3P08254 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 HMGB1P44-201ENST00000508597 572 ntBASIC6.12□□□□□ -1.43
MMP3P08254 MTND6P2-201ENST00000512226 524 ntBASIC6.12□□□□□ -1.43
MMP3P08254 SCARNA16.4-201ENST00000516956 187 ntBASIC6.12□□□□□ -1.43
MMP3P08254 MTND1P36-201ENST00000522384 936 ntBASIC6.12□□□□□ -1.43
MMP3P08254 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.12□□□□□ -1.43
MMP3P08254 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.12□□□□□ -1.43
MMP3P08254 RPL10P14-201ENST00000565265 298 ntBASIC6.12□□□□□ -1.43
MMP3P08254 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 AP005403.1-201ENST00000579720 229 ntBASIC6.12□□□□□ -1.43
MMP3P08254 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 ADAD1P2-201ENST00000588476 646 ntBASIC6.12□□□□□ -1.43
MMP3P08254 AC069307.1-201ENST00000602820 447 ntBASIC6.12□□□□□ -1.43
MMP3P08254 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 AC117490.2-201ENST00000610042 594 ntBASIC6.12□□□□□ -1.43
MMP3P08254 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.12□□□□□ -1.43
MMP3P08254 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
MMP3P08254 AC011933.2-201ENST00000578539 2790 ntBASIC6.12□□□□□ -1.43
MMP3P08254 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 AC068870.1-201ENST00000563737 2455 ntBASIC6.11□□□□□ -1.43
MMP3P08254 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP3P08254 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 AL121886.1-201ENST00000358609 435 ntBASIC6.11□□□□□ -1.43
MMP3P08254 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 RNU1-43P-201ENST00000365052 165 ntBASIC6.11□□□□□ -1.43
MMP3P08254 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 AL121977.1-201ENST00000401636 979 ntBASIC6.11□□□□□ -1.43
MMP3P08254 DUTP5-201ENST00000406790 469 ntBASIC6.11□□□□□ -1.43
MMP3P08254 RNU2-72P-201ENST00000411175 163 ntBASIC6.11□□□□□ -1.43
MMP3P08254 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP3P08254 RPSAP35-201ENST00000413753 818 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 MTCO3P43-201ENST00000440974 771 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AL645937.3-201ENST00000453647 936 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AL389915.2-201ENST00000454576 441 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP3P08254 HMGN1P8-201ENST00000463578 288 ntBASIC6.11□□□□□ -1.43
MMP3P08254 BX284632.1-201ENST00000478218 541 ntBASIC6.11□□□□□ -1.43
MMP3P08254 ATP5LP5-201ENST00000483050 299 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP3P08254 EIF4A2P5-201ENST00000529914 499 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC6.11□□□□□ -1.43
MMP3P08254 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 AC087763.1-201ENST00000603391 286 ntBASIC6.11□□□□□ -1.43
MMP3P08254 AC022387.2-201ENST00000604050 448 ntBASIC6.11□□□□□ -1.43
MMP3P08254 TAS2R6P-201ENST00000605022 826 ntBASIC6.11□□□□□ -1.43
MMP3P08254 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP3P08254 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP3P08254 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP3P08254 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.11□□□□□ -1.43
MMP3P08254 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 AC069542.2-201ENST00000624816 216 ntBASIC6.11□□□□□ -1.43
MMP3P08254 CYP4F35P-202ENST00000636121 390 ntBASIC6.11□□□□□ -1.43
MMP3P08254 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 AL022323.4-201ENST00000623980 13120 ntBASIC6.11□□□□□ -1.43
MMP3P08254 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
MMP3P08254 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
MMP3P08254 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.11□□□□□ -1.43
MMP3P08254 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
MMP3P08254 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.1□□□□□ -1.43
MMP3P08254 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.1□□□□□ -1.43
MMP3P08254 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
MMP3P08254 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.1□□□□□ -1.43
MMP3P08254 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
MMP3P08254 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
MMP3P08254 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
MMP3P08254 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms