Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.15□□□□□ -1.59
MT-ND1P03886 AC091932.2-201ENST00000623014 291 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 AC099654.6-201ENST00000636487 512 ntBASIC5.15□□□□□ -1.59
MT-ND1P03886 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
MT-ND1P03886 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
MT-ND1P03886 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.15□□□□□ -1.59
MT-ND1P03886 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
MT-ND1P03886 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 RNA5SP273-201ENST00000362484 113 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 OR1L6-202ENST00000373684 1044 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC240504.1-201ENST00000395709 845 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 NENFP1-201ENST00000419476 466 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 MTCO1P51-201ENST00000427672 1060 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 RPL19P16-201ENST00000433839 588 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AC090804.1-201ENST00000448870 490 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 MYL12BP2-201ENST00000503948 512 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.14□□□□□ -1.59
MT-ND1P03886 Y_RNA.667-201ENST00000516212 107 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 RNA5SP438-201ENST00000516561 112 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 CDC42P3-201ENST00000518493 633 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC025857.1-201ENST00000525252 377 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AP000648.1-201ENST00000529682 397 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 OR8G3P-201ENST00000533406 921 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.14□□□□□ -1.59
MT-ND1P03886 AL031601.1-201ENST00000605702 394 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 FAM72A-208ENST00000607379 1139 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 AC010266.2-201ENST00000564741 3255 ntBASIC5.14□□□□□ -1.59
MT-ND1P03886 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.14□□□□□ -1.59
MT-ND1P03886 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.14□□□□□ -1.59
MT-ND1P03886 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
MT-ND1P03886 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
MT-ND1P03886 THAP12P5-201ENST00000405864 2275 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 MTCO1P15-201ENST00000529569 1526 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 MT-RNR2-201ENST00000387347 1559 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
MT-ND1P03886 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.13□□□□□ -1.59
MT-ND1P03886 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 OR9K1P-201ENST00000326513 941 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 RNA5SP477-201ENST00000362639 119 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 RNU6-697P-201ENST00000363348 107 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 RNU1-65P-201ENST00000363919 148 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 OR13C3-201ENST00000374781 1108 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 RNU6-729P-201ENST00000384399 107 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
MT-ND1P03886 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.13□□□□□ -1.59
MT-ND1P03886 RPL7AP49-201ENST00000429522 581 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.13□□□□□ -1.59
MT-ND1P03886 AL591438.1-201ENST00000433508 581 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.13□□□□□ -1.59
MT-ND1P03886 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.13□□□□□ -1.59
MT-ND1P03886 RBMY2TP-201ENST00000451162 947 ntBASIC5.13□□□□□ -1.59
MT-ND1P03886 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.13□□□□□ -1.59
MT-ND1P03886 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
MT-ND1P03886 MTND6P32-201ENST00000457611 483 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms