Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A1P02462 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.31□□□□□ -1.4
COL4A1P02462 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL4A1P02462 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
COL4A1P02462 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A1P02462 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 AL133482.1-201ENST00000415988 498 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
COL4A1P02462 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A1P02462 LMO7-203ENST00000357063 8237 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 RN7SKP100-201ENST00000411258 284 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 RAB28P1-201ENST00000411517 641 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC092017.2-201ENST00000427600 362 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 HNRNPDLP2-201ENST00000455248 751 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AL672167.3-201ENST00000465951 960 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.3□□□□□ -1.4
COL4A1P02462 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.3□□□□□ -1.4
COL4A1P02462 RN7SKP248-201ENST00000516278 305 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC012400.1-201ENST00000518452 381 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 AC019322.1-201ENST00000571869 389 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.3□□□□□ -1.4
COL4A1P02462 AP001267.4-201ENST00000602598 545 ntBASIC6.3□□□□□ -1.4
COL4A1P02462 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.3□□□□□ -1.4
COL4A1P02462 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
COL4A1P02462 LCOR-201ENST00000286067 4542 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 BX284613.1-201ENST00000452221 1641 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A1P02462 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A1P02462 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 AC006210.2-201ENST00000367074 1545 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
COL4A1P02462 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 AC010928.1-201ENST00000592477 1447 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 AC012618.3-205ENST00000637896 1496 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A1P02462 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A1P02462 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.29□□□□□ -1.4
COL4A1P02462 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC6.29□□□□□ -1.4
COL4A1P02462 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
COL4A1P02462 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
COL4A1P02462 AP002530.1-201ENST00000405705 684 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 RNA5SP113-201ENST00000410486 84 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 AC069213.2-201ENST00000420238 366 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 AC090804.1-201ENST00000448870 490 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 AC092905.1-201ENST00000467527 949 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.29□□□□□ -1.4
COL4A1P02462 OR5AN2P-201ENST00000534535 896 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.29□□□□□ -1.4
COL4A1P02462 MIR4697-201ENST00000582977 78 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 MIR7641-1-201ENST00000627518 61 ntBASIC6.29□□□□□ -1.4
COL4A1P02462 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
COL4A1P02462 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.28□□□□□ -1.4
COL4A1P02462 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 AC004076.2-201ENST00000620532 3323 ntBASIC6.28□□□□□ -1.4
COL4A1P02462 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A1P02462 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.28□□□□□ -1.4
COL4A1P02462 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
COL4A1P02462 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
COL4A1P02462 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms